RBP Type |
Non-canonical_RBPs |
Diseases |
Disease |
Drug |
N.A. |
Main interacting RNAs |
N.A. |
Moonlighting functions |
TF |
Localizations |
N.A. |
BulkPerturb-seq
|
|
Ensembl ID | ENSG00000128710 | Gene ID |
3236 |
Accession |
5133 |
Symbol |
HOXD10 |
Alias |
HOX4;HOX4D;HOX4E;Hox-4.4 |
Full Name |
homeobox D10 |
Status |
Confidence |
Length |
3160 bases |
Strand |
Plus strand |
Position |
2 : 176116778 - 176119937 |
RNA binding domain |
N.A. |
Summary |
|
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
HOXD10-202 |
ENST00000490088 |
1010 |
No protein |
- |
HOXD10-203 |
ENST00000549469 |
906 |
No protein |
- |
HOXD10-201 |
ENST00000249501 |
1785 |
340aa |
ENSP00000249501 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
100916 | Amyotrophic lateral sclerosis 1 | 1E-6 | 24529757 |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
GO:0000785 | part_of chromatin | 1 | ISA | Homo_sapiens(9606) | Component |
GO:0000978 | enables RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1 | IBA | Homo_sapiens(9606) | Function |
GO:0000981 | enables DNA-binding transcription factor activity, RNA polymerase II-specific | 2 | IBA,ISA | Homo_sapiens(9606) | Function |
GO:0001228 | enables DNA-binding transcription activator activity, RNA polymerase II-specific | 1 | IEA | Homo_sapiens(9606) | Function |
GO:0003682 | enables chromatin binding | 1 | IEA | Homo_sapiens(9606) | Function |
GO:0005515 | enables protein binding | 1 | IPI | Homo_sapiens(9606) | Function |
GO:0005634 | is_active_in nucleus | 1 | IBA | Homo_sapiens(9606) | Component |
GO:0005654 | located_in nucleoplasm | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0005829 | located_in cytosol | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0006357 | involved_in regulation of transcription by RNA polymerase II | 1 | IBA | Homo_sapiens(9606) | Process |
GO:0007338 | involved_in single fertilization | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0007519 | involved_in skeletal muscle tissue development | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0008344 | involved_in adult locomotory behavior | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0009952 | involved_in anterior/posterior pattern specification | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0009954 | involved_in proximal/distal pattern formation | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0017053 | part_of transcription repressor complex | 1 | ISS | Homo_sapiens(9606) | Component |
GO:0021520 | involved_in spinal cord motor neuron cell fate specification | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0030326 | involved_in embryonic limb morphogenesis | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0035136 | involved_in forelimb morphogenesis | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0035137 | involved_in hindlimb morphogenesis | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0036464 | located_in cytoplasmic ribonucleoprotein granule | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0045786 | involved_in negative regulation of cell cycle | 1 | NAS | Homo_sapiens(9606) | Process |
GO:0045944 | involved_in positive regulation of transcription by RNA polymerase II | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0048704 | involved_in embryonic skeletal system morphogenesis | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0048935 | involved_in peripheral nervous system neuron development | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0050905 | involved_in neuromuscular process | 1 | IEA | Homo_sapiens(9606) | Process |
GO:1990837 | enables sequence-specific double-stranded DNA binding | 1 | IDA | Homo_sapiens(9606) | Function |