Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions TF
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000128710 Gene ID 3236 Accession 5133
Symbol HOXD10 Alias HOX4;HOX4D;HOX4E;Hox-4.4 Full Name homeobox D10
Status Confidence Length 3160 bases Strand Plus strand
Position 2 : 176116778 - 176119937 RNA binding domain N.A.
Summary

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
HOXD10-202 ENST00000490088 1010 No protein -
HOXD10-203 ENST00000549469 906 No protein -
HOXD10-201 ENST00000249501 1785 340aa ENSP00000249501

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
100916Amyotrophic lateral sclerosis 11E-624529757

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000785part_of chromatin1ISAHomo_sapiens(9606)Component
GO:0000978enables RNA polymerase II cis-regulatory region sequence-specific DNA binding1IBAHomo_sapiens(9606)Function
GO:0000981enables DNA-binding transcription factor activity, RNA polymerase II-specific2IBA,ISAHomo_sapiens(9606)Function
GO:0001228enables DNA-binding transcription activator activity, RNA polymerase II-specific1IEAHomo_sapiens(9606)Function
GO:0003682enables chromatin binding1IEAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1IDAHomo_sapiens(9606)Component
GO:0006357involved_in regulation of transcription by RNA polymerase II1IBAHomo_sapiens(9606)Process
GO:0007338involved_in single fertilization1IEAHomo_sapiens(9606)Process
GO:0007519involved_in skeletal muscle tissue development1IEAHomo_sapiens(9606)Process
GO:0008344involved_in adult locomotory behavior1IEAHomo_sapiens(9606)Process
GO:0009952involved_in anterior/posterior pattern specification1IEAHomo_sapiens(9606)Process
GO:0009954involved_in proximal/distal pattern formation1IEAHomo_sapiens(9606)Process
GO:0017053part_of transcription repressor complex1ISSHomo_sapiens(9606)Component
GO:0021520involved_in spinal cord motor neuron cell fate specification1IEAHomo_sapiens(9606)Process
GO:0030326involved_in embryonic limb morphogenesis1IEAHomo_sapiens(9606)Process
GO:0035136involved_in forelimb morphogenesis1IEAHomo_sapiens(9606)Process
GO:0035137involved_in hindlimb morphogenesis1IEAHomo_sapiens(9606)Process
GO:0036464located_in cytoplasmic ribonucleoprotein granule1IDAHomo_sapiens(9606)Component
GO:0045786involved_in negative regulation of cell cycle1NASHomo_sapiens(9606)Process
GO:0045944involved_in positive regulation of transcription by RNA polymerase II1IEAHomo_sapiens(9606)Process
GO:0048704involved_in embryonic skeletal system morphogenesis1IEAHomo_sapiens(9606)Process
GO:0048935involved_in peripheral nervous system neuron development1IEAHomo_sapiens(9606)Process
GO:0050905involved_in neuromuscular process1IEAHomo_sapiens(9606)Process
GO:1990837enables sequence-specific double-stranded DNA binding1IDAHomo_sapiens(9606)Function

Expression