Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000126883 Gene ID 8021 Accession 8064
Symbol NUP214 Alias CAN;CAIN;IIAE9 Full Name nucleoporin 214
Status Confidence Length 109091 bases Strand Plus strand
Position 9 : 131125573 - 131234663 RNA binding domain N.A.
Summary The nuclear pore complex is a massive structure that extends across the nuclear envelope, forming a gateway that regulates the flow of macromolecules between the nucleus and the cytoplasm. Nucleoporins are the main components of the nuclear pore complex in eukaryotic cells. This gene is a member of the FG-repeat-containing nucleoporins. The protein encoded by this gene is localized to the cytoplasmic face of the nuclear pore complex where it is required for proper cell cycle progression and nucleocytoplasmic transport. The 3' portion of this gene forms a fusion gene with the DEK gene on chromosome 6 in a t(6,9) translocation associated with acute myeloid leukemia and myelodysplastic syndrome. Alternative splicing of this gene results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2015]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
19219046 The mRNA export protein DBP5 binds RNA and the cytoplasmic nucleoporin NUP214 in a mutually exclusive manner. Holger H von 2009-03-01 Nature structural & molecular biology
29809148 Exportin Crm1 is repurposed as a docking protein to generate microtubule organizing centers at the nuclear pore. X Xun Bao 2018-05-29 eLife
37254647 Nucleoporin foci are stress-sensitive condensates dispensable for C. elegans nuclear pore assembly. Laura Thomas 2023-07-03 The EMBO journal
35974102 Chromothripsis is a frequent event and underlies typical genetic changes in early T-cell precursor lymphoblastic leukemia in adults. Silvia Arniani 2022-11-01 Leukemia
36288392 Understanding a high-risk acute myeloid leukemia by analyzing the interactome of its major driver mutation. Claudia Chiriches 2022-10-01 PLoS genetics
31755865 Chromatin-bound CRM1 recruits SET-Nup214 and NPM1c onto HOX clusters causing aberrant HOX expression in leukemia cells. Masahiro Oka 2019-11-22 eLife
30883195 The Structure of the Nuclear Pore Complex (An Update). H Daniel Lin 2019-06-20 Annual review of biochemistry

Transcripts

Name Transcript ID bp Protein Translation ID
NUP214-232 ENST00000695493 3697 No protein -
NUP214-233 ENST00000695494 2487 No protein -
NUP214-234 ENST00000695495 5402 No protein -
NUP214-235 ENST00000695496 4266 No protein -
NUP214-236 ENST00000695497 7272 1145aa ENSP00000511963
NUP214-237 ENST00000695498 7506 1848aa ENSP00000511964
NUP214-201 ENST00000359428 7568 2090aa ENSP00000352400
NUP214-202 ENST00000411637 7538 2080aa ENSP00000396576
NUP214-213 ENST00000525561 3399 No protein -
NUP214-231 ENST00000652454 6537 2078aa ENSP00000499001
NUP214-228 ENST00000651022 2160 720aa ENSP00000498226
NUP214-230 ENST00000651639 907 187aa ENSP00000498545
NUP214-224 ENST00000531584 545 52aa ENSP00000435874
NUP214-238 ENST00000695499 1583 No protein -
NUP214-216 ENST00000526412 551 No protein -
NUP214-222 ENST00000530843 189 No protein -
NUP214-223 ENST00000530863 560 187aa ENSP00000434223
NUP214-214 ENST00000525980 2274 No protein -
NUP214-221 ENST00000530630 536 No protein -
NUP214-208 ENST00000489260 649 No protein -
NUP214-215 ENST00000526346 577 140aa ENSP00000437139
NUP214-226 ENST00000531929 593 No protein -
NUP214-229 ENST00000651334 609 203aa ENSP00000498792
NUP214-211 ENST00000524578 6939 No protein -
NUP214-203 ENST00000453861 3208 967aa ENSP00000416934
NUP214-205 ENST00000470765 620 No protein -
NUP214-207 ENST00000483497 3275 916aa ENSP00000436793
NUP214-204 ENST00000465486 1068 No protein -
NUP214-225 ENST00000531600 1775 495aa ENSP00000435364
NUP214-217 ENST00000528114 575 No protein -
NUP214-212 ENST00000525384 840 No protein -
NUP214-239 ENST00000695500 4052 No protein -
NUP214-219 ENST00000529286 493 No protein -
NUP214-227 ENST00000650694 1655 437aa ENSP00000498774
NUP214-240 ENST00000695501 4405 No protein -
NUP214-220 ENST00000530491 502 No protein -
NUP214-210 ENST00000498010 388 113aa ENSP00000435583
NUP214-206 ENST00000476004 502 145aa ENSP00000433606
NUP214-218 ENST00000528406 393 78aa ENSP00000433654
NUP214-209 ENST00000496921 2977 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005049enables nuclear export signal receptor activity1IDAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005635located_in nuclear envelope1IDAHomo_sapiens(9606)Component
GO:0005643part_of nuclear pore2IBA,NASHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1TASHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0006405involved_in RNA export from nucleus1IBAHomo_sapiens(9606)Process
GO:0006406involved_in mRNA export from nucleus1IMPHomo_sapiens(9606)Process
GO:0006606involved_in protein import into nucleus1IBAHomo_sapiens(9606)Process
GO:0006611acts_upstream_of_or_within protein export from nucleus1IMPHomo_sapiens(9606)Process
GO:0006913involved_in nucleocytoplasmic transport1NASHomo_sapiens(9606)Process
GO:0008139enables nuclear localization sequence binding1IBAHomo_sapiens(9606)Function
GO:0017056enables structural constituent of nuclear pore1IBAHomo_sapiens(9606)Function
GO:0046822involved_in regulation of nucleocytoplasmic transport1IMPHomo_sapiens(9606)Process
GO:0051726involved_in regulation of cell cycle1IEAHomo_sapiens(9606)Process
GO:1990876located_in cytoplasmic side of nuclear pore1IDAHomo_sapiens(9606)Component

Expression