RBP Type |
Non-canonical_RBPs |
Diseases |
N.A. |
Drug |
N.A. |
Main interacting RNAs |
N.A. |
Moonlighting functions |
N.A. |
Localizations |
Nucleoli |
BulkPerturb-seq
|
|
Ensembl ID | ENSG00000126226 | Gene ID |
55795 |
Accession |
25653 |
Symbol |
PCID2 |
Alias |
|
Full Name |
|
Status |
Confidence |
Length |
31180 bases |
Strand |
Minus strand |
Position |
13 : 113177536 - 113208715 |
RNA binding domain |
N.A. |
Summary |
|
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
PCID2-202 |
ENST00000337344 |
1897 |
399aa |
ENSP00000337405 |
PCID2-216 |
ENST00000622406 |
1937 |
453aa |
ENSP00000479494 |
PCID2-205 |
ENST00000375477 |
1654 |
399aa |
ENSP00000364626 |
PCID2-206 |
ENST00000375479 |
1671 |
399aa |
ENSP00000364628 |
PCID2-209 |
ENST00000463102 |
599 |
No protein |
- |
PCID2-215 |
ENST00000493650 |
4202 |
No protein |
- |
PCID2-204 |
ENST00000375459 |
1668 |
397aa |
ENSP00000364608 |
PCID2-201 |
ENST00000246505 |
1786 |
453aa |
ENSP00000246505 |
PCID2-207 |
ENST00000462653 |
669 |
No protein |
- |
PCID2-203 |
ENST00000375457 |
2372 |
397aa |
ENSP00000364606 |
PCID2-210 |
ENST00000473462 |
859 |
No protein |
- |
PCID2-211 |
ENST00000475433 |
776 |
No protein |
- |
PCID2-212 |
ENST00000480971 |
701 |
No protein |
- |
PCID2-213 |
ENST00000484641 |
800 |
No protein |
- |
PCID2-214 |
ENST00000491548 |
654 |
No protein |
- |
PCID2-208 |
ENST00000462853 |
413 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
GO:0000973 | involved_in post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery | 1 | IBA | Homo_sapiens(9606) | Process |
GO:0003690 | enables double-stranded DNA binding | 1 | IBA | Homo_sapiens(9606) | Function |
GO:0003723 | enables RNA binding | 1 | IBA | Homo_sapiens(9606) | Function |
GO:0005515 | enables protein binding | 1 | IPI | Homo_sapiens(9606) | Function |
GO:0005634 | located_in nucleus | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0005737 | located_in cytoplasm | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0006368 | involved_in transcription elongation by RNA polymerase II | 1 | IBA | Homo_sapiens(9606) | Process |
GO:0015031 | involved_in protein transport | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0016973 | involved_in poly(A)+ mRNA export from nucleus | 1 | IBA | Homo_sapiens(9606) | Process |
GO:0043066 | involved_in negative regulation of apoptotic process | 1 | IMP | Homo_sapiens(9606) | Process |
GO:0043488 | involved_in regulation of mRNA stability | 1 | IMP | Homo_sapiens(9606) | Process |
GO:0044615 | part_of nuclear pore nuclear basket | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0045579 | involved_in positive regulation of B cell differentiation | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0045893 | involved_in positive regulation of DNA-templated transcription | 1 | IMP | Homo_sapiens(9606) | Process |
GO:0048536 | involved_in spleen development | 1 | ISS | Homo_sapiens(9606) | Process |
GO:0060633 | involved_in negative regulation of transcription initiation by RNA polymerase II | 1 | ISS | Homo_sapiens(9606) | Process |
GO:0070390 | part_of transcription export complex 2 | 2 | IBA,IDA | Homo_sapiens(9606) | Component |
GO:0070828 | involved_in heterochromatin organization | 1 | ISS | Homo_sapiens(9606) | Process |
GO:0090267 | involved_in positive regulation of mitotic cell cycle spindle assembly checkpoint | 1 | IMP | Homo_sapiens(9606) | Process |
GO:1905457 | involved_in negative regulation of lymphoid progenitor cell differentiation | 1 | ISS | Homo_sapiens(9606) | Process |
GO:2000117 | involved_in negative regulation of cysteine-type endopeptidase activity | 1 | IMP | Homo_sapiens(9606) | Process |