RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Functions and Diseases

RBP Type	Canonical_RBPs
Diseases	N.A.
Drug	N.A.
Main interacting RNAs	N.A.
Moonlighting functions	E3 ligase
Localizations	Nucleoli
BulkPerturb-seq

Description

Ensembl ID	ENSG00000124900	Gene ID	84767	Accession	19023
Symbol	TRIM51	Alias	SPRYD5;TRIM51A	Full Name	tripartite motif-containing 51
Status	Confidence	Length	8514 bases	Strand	Plus strand
Position	11 : 55883297 - 55891810	RNA binding domain	SPRY
Summary	Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in innate immune response; protein ubiquitination; and regulation of gene expression. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSP00000244891	SPRY	PF00622	3.2e-07	1
ENSP00000395086	SPRY	PF00622	6e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
TRIM51-202	ENST00000449290	1629	452aa	ENSP00000395086
TRIM51-201	ENST00000244891	1329	309aa	ENSP00000244891

Gene Model

Click here to download ENSG00000124900's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID
32810	Body Mass Index	9.6729887E-005	-
32831	Body Mass Index	9.6577257E-005	-
32832	Body Mass Index	9.6501072E-005	-
32858	Body Mass Index	9.2052279E-005	-
32859	Body Mass Index	9.1855646E-005	-
32876	Body Mass Index	9.2175504E-005	-

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSG00000124900's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0005737	is_active_in cytoplasm	1	IBA	Homo_sapiens(9606)	Component
GO:0008270	enables zinc ion binding	1	IEA	Homo_sapiens(9606)	Function
GO:0010468	involved_in regulation of gene expression	1	IBA	Homo_sapiens(9606)	Process
GO:0016567	involved_in protein ubiquitination	1	IBA	Homo_sapiens(9606)	Process
GO:0045087	involved_in innate immune response	1	IBA	Homo_sapiens(9606)	Process
GO:0061630	enables ubiquitin protein ligase activity	1	IBA	Homo_sapiens(9606)	Function

Expression