RBP Type
Canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Metabolic enzyme
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000124713 Gene ID
27232
Accession
4415
Symbol
GNMT
Alias
HEL-S-182mP
Full Name
glycine N-methyltransferase
Status
Confidence
Length
3127 bases
Strand
Plus strand
Position
6 : 42960754 - 42963880
RNA binding domain
Methyltransf_31
Summary
The protein encoded by this gene is an enzyme that catalyzes the conversion of S-adenosyl-L-methionine (along with glycine) to S-adenosyl-L-homocysteine and sarcosine. This protein is found in the cytoplasm and acts as a homotetramer. Defects in this gene are a cause of GNMT deficiency (hypermethioninemia). Alternative splicing results in multiple transcript variants. Naturally occurring readthrough transcription occurs between the upstream CNPY3 (canopy FGF signaling regulator 3) gene and this gene and is represented with GeneID:107080644. [provided by RefSeq, Jan 2016]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000361894
Methyltransf_31
PF13847
3.6e-09
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
30115977
MicroRNA-224 down-regulates Glycine N-methyltransferase gene expression in Hepatocellular Carcinoma.
Jung-Hsien Hung
2018-08-16
Scientific reports
Name
Transcript ID
bp
Protein
Translation ID
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005542 enables folic acid binding 1 IEA Homo_sapiens(9606) Function GO:0005829 is_active_in cytosol 3 IBA,IDA,TAS Homo_sapiens(9606) Component GO:0005977 involved_in glycogen metabolic process 1 IEA Homo_sapiens(9606) Process GO:0006111 involved_in regulation of gluconeogenesis 1 IBA Homo_sapiens(9606) Process GO:0006555 involved_in methionine metabolic process 1 IEA Homo_sapiens(9606) Process GO:0006730 involved_in one-carbon metabolic process 1 IBA Homo_sapiens(9606) Process GO:0016594 enables glycine binding 2 IBA,IDA Homo_sapiens(9606) Function GO:0017174 enables glycine N-methyltransferase activity 2 IBA,IDA Homo_sapiens(9606) Function GO:0032259 involved_in methylation 1 IEA Homo_sapiens(9606) Process GO:0036211 involved_in protein modification process 1 NAS Homo_sapiens(9606) Process GO:0042802 enables identical protein binding 2 IBA,IPI Homo_sapiens(9606) Function GO:0046498 involved_in S-adenosylhomocysteine metabolic process 1 IBA Homo_sapiens(9606) Process GO:0046500 involved_in S-adenosylmethionine metabolic process 2 IBA,IDA Homo_sapiens(9606) Process GO:0051289 involved_in protein homotetramerization 2 IBA,IPI Homo_sapiens(9606) Process GO:1901052 involved_in sarcosine metabolic process 1 IBA Homo_sapiens(9606) Process GO:1904047 enables S-adenosyl-L-methionine binding 1 IBA Homo_sapiens(9606) Function
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