RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Metabolic enzyme
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000124641 Gene ID
9477
Accession
16840
Symbol
MED20
Alias
SRB2;TRFP;PRO0213
Full Name
mediator complex subunit 20
Status
Confidence
Length
15786 bases
Strand
Minus strand
Position
6 : 41905354 - 41921139
RNA binding domain
Med20
Summary
This gene encodes a component of the mediator complex (also known as TRAP, SMCC, DRIP, or ARC), a transcriptional coactivator complex thought to be required for the expression of almost all genes. The mediator complex is recruited by transcriptional activators or nuclear receptors to induce gene expression, by interacting with RNA polymerase II and promoting the formation of a transcriptional pre-initiation complex. A mutation in this gene has been associated with a novel infantile-onset neurodegenerative movement disorder. Alternatively spliced transcript variants have been identified. [provided by RefSeq, Mar 2015]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000265350
Med20
PF08612
4.5e-48
1
ENSP00000386668
Med20
PF08612
2.5e-36
1
ENSP00000377795
Med20
PF08612
3.3e-36
1
ENSP00000386816
Med20
PF08612
1.3e-23
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
25416 Waist-Hip Ratio 4.2310000E-005 -
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0003713 enables transcription coactivator activity 1 IBA Homo_sapiens(9606) Function GO:0003899 enables DNA-directed 5-3 RNA polymerase activity 1 NAS Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005634 located_in nucleus 1 IDA Homo_sapiens(9606) Component GO:0005654 located_in nucleoplasm 1 TAS Homo_sapiens(9606) Component GO:0006351 involved_in DNA-templated transcription 1 NAS Homo_sapiens(9606) Process GO:0006357 involved_in regulation of transcription by RNA polymerase II 1 IBA Homo_sapiens(9606) Process GO:0006366 involved_in transcription by RNA polymerase II 1 TAS Homo_sapiens(9606) Process GO:0016592 part_of mediator complex 2 IBA,NAS Homo_sapiens(9606) Component GO:0032968 involved_in positive regulation of transcription elongation by RNA polymerase II 1 NAS Homo_sapiens(9606) Process GO:0035914 involved_in skeletal muscle cell differentiation 1 IEA Homo_sapiens(9606) Process GO:0051123 involved_in RNA polymerase II preinitiation complex assembly 1 NAS Homo_sapiens(9606) Process GO:0060261 involved_in positive regulation of transcription initiation by RNA polymerase II 1 NAS Homo_sapiens(9606) Process GO:0070847 part_of core mediator complex 1 IPI Homo_sapiens(9606) Component
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