RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
E3 ligase
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000116525 Gene ID
55223
Accession
25574
Symbol
TRIM62
Alias
DEAR1
Full Name
tripartite motif containing 62
Status
Confidence
Length
36645 bases
Strand
Minus strand
Position
1 : 33145399 - 33182043
RNA binding domain
SPRY
Summary
Enables identical protein binding activity; transcription coactivator activity; and ubiquitin-protein transferase activity. Involved in several processes, including negative regulation of viral transcription; positive regulation of NF-kappaB transcription factor activity; and positive regulation of antifungal innate immune response. Is active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000441173
SPRY
PF00622
1.7e-14
1
ENSP00000291416
SPRY
PF00622
2.8e-14
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
32341648
Association of DEAR1 Tagging Single Nucleotide Polymorphisms With Breast Cancer in a Sample of Colombian Population: A Case Control Study.
P Angela Beltrán
2020-01-01
Breast cancer : basic and clinical research
Name
Transcript ID
bp
Protein
Translation ID
TRIM62-201
ENST00000291416
3817
475aa
ENSP00000291416
TRIM62-204
ENST00000543586
1638
354aa
ENSP00000441173
TRIM62-202
ENST00000485148
806
No protein
-
TRIM62-203
ENST00000486583
306
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0003713 enables transcription coactivator activity 1 IDA Homo_sapiens(9606) Function GO:0004842 enables ubiquitin-protein transferase activity 1 IDA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005737 is_active_in cytoplasm 3 IBA,IDA Homo_sapiens(9606) Component GO:0005829 located_in cytosol 1 TAS Homo_sapiens(9606) Component GO:0008270 enables zinc ion binding 1 IEA Homo_sapiens(9606) Function GO:0010719 involved_in negative regulation of epithelial to mesenchymal transition 1 IEA Homo_sapiens(9606) Process GO:0016567 involved_in protein ubiquitination 1 IBA Homo_sapiens(9606) Process GO:0019076 involved_in viral release from host cell 1 IMP Homo_sapiens(9606) Process GO:0032897 involved_in negative regulation of viral transcription 1 IDA Homo_sapiens(9606) Process GO:0042802 enables identical protein binding 1 IPI Homo_sapiens(9606) Function GO:0043123 involved_in positive regulation of I-kappaB kinase/NF-kappaB signaling 2 IBA,IDA Homo_sapiens(9606) Process GO:0044314 involved_in protein K27-linked ubiquitination 1 IDA Homo_sapiens(9606) Process GO:0045087 involved_in innate immune response 2 IBA,IMP Homo_sapiens(9606) Process GO:0045893 involved_in positive regulation of DNA-templated transcription 1 IEA Homo_sapiens(9606) Process GO:0046596 involved_in regulation of viral entry into host cell 1 IDA Homo_sapiens(9606) Process GO:0051091 involved_in positive regulation of DNA-binding transcription factor activity 1 IMP Homo_sapiens(9606) Process GO:0051092 involved_in positive regulation of NF-kappaB transcription factor activity 2 IBA,IMP Homo_sapiens(9606) Process GO:0061630 enables ubiquitin protein ligase activity 1 IBA Homo_sapiens(9606) Function GO:1905036 involved_in positive regulation of antifungal innate immune response 1 IDA Homo_sapiens(9606) Process
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