Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions E3 ligase
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000116525 Gene ID 55223 Accession 25574
Symbol TRIM62 Alias DEAR1 Full Name tripartite motif containing 62
Status Confidence Length 36645 bases Strand Minus strand
Position 1 : 33145399 - 33182043 RNA binding domain SPRY
Summary Enables identical protein binding activity; transcription coactivator activity; and ubiquitin-protein transferase activity. Involved in several processes, including negative regulation of viral transcription; positive regulation of NF-kappaB transcription factor activity; and positive regulation of antifungal innate immune response. Is active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000441173 SPRY PF00622 1.7e-14 1
ENSP00000291416 SPRY PF00622 2.8e-14 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
32341648 Association of DEAR1 Tagging Single Nucleotide Polymorphisms With Breast Cancer in a Sample of Colombian Population: A Case Control Study. P Angela Beltrán 2020-01-01 Breast cancer : basic and clinical research

Transcripts

Name Transcript ID bp Protein Translation ID
TRIM62-201 ENST00000291416 3817 475aa ENSP00000291416
TRIM62-204 ENST00000543586 1638 354aa ENSP00000441173
TRIM62-202 ENST00000485148 806 No protein -
TRIM62-203 ENST00000486583 306 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003713enables transcription coactivator activity1IDAHomo_sapiens(9606)Function
GO:0004842enables ubiquitin-protein transferase activity1IDAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005737is_active_in cytoplasm3IBA,IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0008270enables zinc ion binding1IEAHomo_sapiens(9606)Function
GO:0010719involved_in negative regulation of epithelial to mesenchymal transition1IEAHomo_sapiens(9606)Process
GO:0016567involved_in protein ubiquitination1IBAHomo_sapiens(9606)Process
GO:0019076involved_in viral release from host cell1IMPHomo_sapiens(9606)Process
GO:0032897involved_in negative regulation of viral transcription1IDAHomo_sapiens(9606)Process
GO:0042802enables identical protein binding1IPIHomo_sapiens(9606)Function
GO:0043123involved_in positive regulation of I-kappaB kinase/NF-kappaB signaling2IBA,IDAHomo_sapiens(9606)Process
GO:0044314involved_in protein K27-linked ubiquitination1IDAHomo_sapiens(9606)Process
GO:0045087involved_in innate immune response2IBA,IMPHomo_sapiens(9606)Process
GO:0045893involved_in positive regulation of DNA-templated transcription1IEAHomo_sapiens(9606)Process
GO:0046596involved_in regulation of viral entry into host cell1IDAHomo_sapiens(9606)Process
GO:0051091involved_in positive regulation of DNA-binding transcription factor activity1IMPHomo_sapiens(9606)Process
GO:0051092involved_in positive regulation of NF-kappaB transcription factor activity2IBA,IMPHomo_sapiens(9606)Process
GO:0061630enables ubiquitin protein ligase activity1IBAHomo_sapiens(9606)Function
GO:1905036involved_in positive regulation of antifungal innate immune response1IDAHomo_sapiens(9606)Process

Expression