Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Kinase
Localizations Stress granucle
BulkPerturb-seq

Description

Ensembl ID ENSG00000113712 Gene ID 1452 Accession 2451
Symbol CSNK1A1 Alias CK1;CK1a;CKIa;HLCDGP1;PRO2975;HEL-S-77p Full Name casein kinase 1 alpha 1
Status Confidence Length 58490 bases Strand Minus strand
Position 5 : 149492982 - 149551471 RNA binding domain N.A.
Summary Enables protein serine/threonine kinase activity. Involved in several processes, including negative regulation of canonical Wnt signaling pathway; peptidyl-serine phosphorylation; and positive regulation of proteasomal ubiquitin-dependent protein catabolic process. Located in centrosome; cytosol; and nuclear speck. Part of beta-catenin destruction complex. Colocalizes with keratin filament and mRNA cleavage and polyadenylation specificity factor complex. Biomarker of Alzheimer's disease and inclusion body myositis. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
CSNK1A1-201 ENST00000261798 5444 365aa ENSP00000261798
CSNK1A1-202 ENST00000377843 5360 337aa ENSP00000367074
CSNK1A1-212 ENST00000657001 4902 325aa ENSP00000499757
CSNK1A1-207 ENST00000515768 2570 353aa ENSP00000421689
CSNK1A1-210 ENST00000606719 2476 368aa ENSP00000475319
CSNK1A1-213 ENST00000657462 2052 77aa ENSP00000499532
CSNK1A1-215 ENST00000661952 2413 77aa ENSP00000499647
CSNK1A1-204 ENST00000504676 1772 236aa ENSP00000426747
CSNK1A1-205 ENST00000515435 1856 264aa ENSP00000427031
CSNK1A1-216 ENST00000662268 1848 No protein -
CSNK1A1-214 ENST00000657706 3315 426aa ENSP00000499284
CSNK1A1-211 ENST00000606826 800 184aa ENSP00000475969
CSNK1A1-203 ENST00000503350 1099 167aa ENSP00000425366
CSNK1A1-209 ENST00000606299 599 83aa ENSP00000475633
CSNK1A1-217 ENST00000670598 867 150aa ENSP00000499782
CSNK1A1-208 ENST00000523203 775 78aa ENSP00000430252
CSNK1A1-206 ENST00000515748 620 89aa ENSP00000421268

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
86669Esophageal Neoplasms5E-921642993

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000776located_in kinetochore1IEAHomo_sapiens(9606)Component
GO:0004672enables protein kinase activity2ISS,TASHomo_sapiens(9606)Function
GO:0004674enables protein serine/threonine kinase activity6EXP,IBA,IDA,IMP,ISS,TASHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005524enables ATP binding1IEAHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm1IBAHomo_sapiens(9606)Component
GO:0005813located_in centrosome1IDAHomo_sapiens(9606)Component
GO:0005819located_in spindle1ISSHomo_sapiens(9606)Component
GO:0005829located_in cytosol2IDA,TASHomo_sapiens(9606)Component
GO:0005929located_in cilium1TASHomo_sapiens(9606)Component
GO:0006468involved_in protein phosphorylation1IDAHomo_sapiens(9606)Process
GO:0007030involved_in Golgi organization1IMPHomo_sapiens(9606)Process
GO:0007049involved_in cell cycle1IEAHomo_sapiens(9606)Process
GO:0007165involved_in signal transduction1IBAHomo_sapiens(9606)Process
GO:0007166involved_in cell surface receptor signaling pathway1TASHomo_sapiens(9606)Process
GO:0016020located_in membrane1HDAHomo_sapiens(9606)Component
GO:0016055involved_in Wnt signaling pathway1TASHomo_sapiens(9606)Process
GO:0016607located_in nuclear speck1IDAHomo_sapiens(9606)Component
GO:0018105involved_in peptidyl-serine phosphorylation3IBA,IDA,IMPHomo_sapiens(9606)Process
GO:0019082involved_in viral protein processing1TASHomo_sapiens(9606)Process
GO:0030877part_of beta-catenin destruction complex2IDA,NASHomo_sapiens(9606)Component
GO:0032436involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process2IDA,IMPHomo_sapiens(9606)Process
GO:0036064located_in ciliary basal body1ISSHomo_sapiens(9606)Component
GO:0043161involved_in proteasome-mediated ubiquitin-dependent protein catabolic process1NASHomo_sapiens(9606)Process
GO:0045095colocalizes_with keratin filament1IDAHomo_sapiens(9606)Component
GO:0045104involved_in intermediate filament cytoskeleton organization1IMPHomo_sapiens(9606)Process
GO:0051301involved_in cell division1IEAHomo_sapiens(9606)Process
GO:0090090involved_in negative regulation of canonical Wnt signaling pathway3IBA,IC,IMPHomo_sapiens(9606)Process
GO:0106310enables protein serine kinase activity1IEAHomo_sapiens(9606)Function
GO:1900226involved_in negative regulation of NLRP3 inflammasome complex assembly1ISSHomo_sapiens(9606)Process
GO:1904424involved_in regulation of GTP binding1IMPHomo_sapiens(9606)Process

Expression