RBP Type
Non-canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Kinase
Localizations
Stress granucle
BulkPerturb-seq
Ensembl ID ENSG00000113712 Gene ID
1452
Accession
2451
Symbol
CSNK1A1
Alias
CK1;CK1a;CKIa;HLCDGP1;PRO2975;HEL-S-77p
Full Name
casein kinase 1 alpha 1
Status
Confidence
Length
58490 bases
Strand
Minus strand
Position
5 : 149492982 - 149551471
RNA binding domain
N.A.
Summary
Enables protein serine/threonine kinase activity. Involved in several processes, including negative regulation of canonical Wnt signaling pathway; peptidyl-serine phosphorylation; and positive regulation of proteasomal ubiquitin-dependent protein catabolic process. Located in centrosome; cytosol; and nuclear speck. Part of beta-catenin destruction complex. Colocalizes with keratin filament and mRNA cleavage and polyadenylation specificity factor complex. Biomarker of Alzheimer's disease and inclusion body myositis. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
CSNK1A1-201
ENST00000261798
5444
365aa
ENSP00000261798
CSNK1A1-202
ENST00000377843
5360
337aa
ENSP00000367074
CSNK1A1-212
ENST00000657001
4902
325aa
ENSP00000499757
CSNK1A1-207
ENST00000515768
2570
353aa
ENSP00000421689
CSNK1A1-210
ENST00000606719
2476
368aa
ENSP00000475319
CSNK1A1-213
ENST00000657462
2052
77aa
ENSP00000499532
CSNK1A1-215
ENST00000661952
2413
77aa
ENSP00000499647
CSNK1A1-204
ENST00000504676
1772
236aa
ENSP00000426747
CSNK1A1-205
ENST00000515435
1856
264aa
ENSP00000427031
CSNK1A1-216
ENST00000662268
1848
No protein
-
CSNK1A1-214
ENST00000657706
3315
426aa
ENSP00000499284
CSNK1A1-211
ENST00000606826
800
184aa
ENSP00000475969
CSNK1A1-203
ENST00000503350
1099
167aa
ENSP00000425366
CSNK1A1-209
ENST00000606299
599
83aa
ENSP00000475633
CSNK1A1-217
ENST00000670598
867
150aa
ENSP00000499782
CSNK1A1-208
ENST00000523203
775
78aa
ENSP00000430252
CSNK1A1-206
ENST00000515748
620
89aa
ENSP00000421268
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
86669 Esophageal Neoplasms 5E-9 21642993
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000776 located_in kinetochore 1 IEA Homo_sapiens(9606) Component GO:0004672 enables protein kinase activity 2 ISS,TAS Homo_sapiens(9606) Function GO:0004674 enables protein serine/threonine kinase activity 6 EXP,IBA,IDA,IMP,ISS,TAS Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005524 enables ATP binding 1 IEA Homo_sapiens(9606) Function GO:0005634 is_active_in nucleus 1 IBA Homo_sapiens(9606) Component GO:0005737 is_active_in cytoplasm 1 IBA Homo_sapiens(9606) Component GO:0005813 located_in centrosome 1 IDA Homo_sapiens(9606) Component GO:0005819 located_in spindle 1 ISS Homo_sapiens(9606) Component GO:0005829 located_in cytosol 2 IDA,TAS Homo_sapiens(9606) Component GO:0005929 located_in cilium 1 TAS Homo_sapiens(9606) Component GO:0006468 involved_in protein phosphorylation 1 IDA Homo_sapiens(9606) Process GO:0007030 involved_in Golgi organization 1 IMP Homo_sapiens(9606) Process GO:0007049 involved_in cell cycle 1 IEA Homo_sapiens(9606) Process GO:0007165 involved_in signal transduction 1 IBA Homo_sapiens(9606) Process GO:0007166 involved_in cell surface receptor signaling pathway 1 TAS Homo_sapiens(9606) Process GO:0016020 located_in membrane 1 HDA Homo_sapiens(9606) Component GO:0016055 involved_in Wnt signaling pathway 1 TAS Homo_sapiens(9606) Process GO:0016607 located_in nuclear speck 1 IDA Homo_sapiens(9606) Component GO:0018105 involved_in peptidyl-serine phosphorylation 3 IBA,IDA,IMP Homo_sapiens(9606) Process GO:0019082 involved_in viral protein processing 1 TAS Homo_sapiens(9606) Process GO:0030877 part_of beta-catenin destruction complex 2 IDA,NAS Homo_sapiens(9606) Component GO:0032436 involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process 2 IDA,IMP Homo_sapiens(9606) Process GO:0036064 located_in ciliary basal body 1 ISS Homo_sapiens(9606) Component GO:0043161 involved_in proteasome-mediated ubiquitin-dependent protein catabolic process 1 NAS Homo_sapiens(9606) Process GO:0045095 colocalizes_with keratin filament 1 IDA Homo_sapiens(9606) Component GO:0045104 involved_in intermediate filament cytoskeleton organization 1 IMP Homo_sapiens(9606) Process GO:0051301 involved_in cell division 1 IEA Homo_sapiens(9606) Process GO:0090090 involved_in negative regulation of canonical Wnt signaling pathway 3 IBA,IC,IMP Homo_sapiens(9606) Process GO:0106310 enables protein serine kinase activity 1 IEA Homo_sapiens(9606) Function GO:1900226 involved_in negative regulation of NLRP3 inflammasome complex assembly 1 ISS Homo_sapiens(9606) Process GO:1904424 involved_in regulation of GTP binding 1 IMP Homo_sapiens(9606) Process
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