RBP Type
Non-canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Metabolic enzyme
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000110090 Gene ID
1374
Accession
2328
Symbol
CPT1A
Alias
CPT1;CPT1-L;L-CPT1
Full Name
carnitine palmitoyltransferase 1A
Status
Confidence
Length
89791 bases
Strand
Minus strand
Position
11 : 68754620 - 68844410
RNA binding domain
N.A.
Summary
The mitochondrial oxidation of long-chain fatty acids is initiated by the sequential action of carnitine palmitoyltransferase I (which is located in the outer membrane and is detergent-labile) and carnitine palmitoyltransferase II (which is located in the inner membrane and is detergent-stable), together with a carnitine-acylcarnitine translocase. CPT I is the key enzyme in the carnitine-dependent transport across the mitochondrial inner membrane and its deficiency results in a decreased rate of fatty acid beta-oxidation. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
CPT1A-206
ENST00000540367
2496
756aa
ENSP00000439084
CPT1A-202
ENST00000376618
2635
756aa
ENSP00000365803
CPT1A-201
ENST00000265641
5238
773aa
ENSP00000265641
CPT1A-205
ENST00000539743
2382
773aa
ENSP00000446108
CPT1A-203
ENST00000537756
585
No protein
-
CPT1A-204
ENST00000538994
617
78aa
ENSP00000454332
CPT1A-208
ENST00000565318
511
134aa
ENSP00000457826
CPT1A-209
ENST00000569129
499
117aa
ENSP00000455116
CPT1A-207
ENST00000561996
559
93aa
ENSP00000457663
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
26337 Arteries 3.7500000E-005 - 40178 Platelet Function Tests 5.2300000E-006 - 48104 Autistic Disorder 1.3578000E-005 - 49810 Child Development Disorders, Pervasive 5.6331200E-005 - 50426 Child Development Disorders, Pervasive 1.7345000E-005 - 51854 Child Development Disorders, Pervasive 2.2193000E-005 - 72960 Energy Metabolism 4E-6 23251661
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0001676 involved_in long-chain fatty acid metabolic process 1 IDA Homo_sapiens(9606) Process GO:0004095 enables carnitine O-palmitoyltransferase activity 4 IBA,IDA,IMP,TAS Homo_sapiens(9606) Function GO:0005739 is_active_in mitochondrion 2 IBA,IDA Homo_sapiens(9606) Component GO:0005741 located_in mitochondrial outer membrane 3 IMP,ISS,TAS Homo_sapiens(9606) Component GO:0006006 involved_in glucose metabolic process 1 IEA Homo_sapiens(9606) Process GO:0006631 involved_in fatty acid metabolic process 1 IBA Homo_sapiens(9606) Process GO:0006635 involved_in fatty acid beta-oxidation 1 IEA Homo_sapiens(9606) Process GO:0006641 involved_in triglyceride metabolic process 1 IEA Homo_sapiens(9606) Process GO:0006853 involved_in carnitine shuttle 1 TAS Homo_sapiens(9606) Process GO:0009410 involved_in response to xenobiotic stimulus 1 IEA Homo_sapiens(9606) Process GO:0009437 involved_in carnitine metabolic process 2 IBA,IDA Homo_sapiens(9606) Process GO:0010883 involved_in regulation of lipid storage 1 IEA Homo_sapiens(9606) Process GO:0014070 involved_in response to organic cyclic compound 1 IEA Homo_sapiens(9606) Process GO:0016020 located_in membrane 1 HDA Homo_sapiens(9606) Component GO:0030855 involved_in epithelial cell differentiation 1 IEP Homo_sapiens(9606) Process GO:0031667 involved_in response to nutrient levels 1 IEA Homo_sapiens(9606) Process GO:0032000 involved_in positive regulation of fatty acid beta-oxidation 1 IEA Homo_sapiens(9606) Process GO:0042755 involved_in eating behavior 1 IEA Homo_sapiens(9606) Process GO:0042802 enables identical protein binding 1 IEA Homo_sapiens(9606) Function GO:0043279 involved_in response to alkaloid 1 IEA Homo_sapiens(9606) Process GO:0045471 involved_in response to ethanol 1 IEA Homo_sapiens(9606) Process GO:0050796 involved_in regulation of insulin secretion 1 IEA Homo_sapiens(9606) Process GO:0071398 involved_in cellular response to fatty acid 1 IEA Homo_sapiens(9606) Process GO:0097421 involved_in liver regeneration 1 IEA Homo_sapiens(9606) Process GO:1904772 involved_in response to tetrachloromethane 1 IEA Homo_sapiens(9606) Process GO:1990698 enables palmitoleoyltransferase activity 1 IEA Homo_sapiens(9606) Function
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