RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Functions and Diseases

RBP Type	Non-canonical_RBPs
Diseases	N.A.
Drug	N.A.
Main interacting RNAs	N.A.
Moonlighting functions	Metabolic enzyme
Localizations	N.A.
BulkPerturb-seq

Description

Ensembl ID	ENSG00000106603	Gene ID	55744	Accession	21868
Symbol	COA1	Alias		Full Name
Status	Confidence	Length	121262 bases	Strand	Minus strand
Position	7 : 43608456 - 43729717	RNA binding domain	N.A.
Summary

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
COA1-204	ENST00000415076	1737	146aa	ENSP00000400759
COA1-210	ENST00000446330	1520	146aa	ENSP00000416406
COA1-211	ENST00000446564	1177	146aa	ENSP00000413777
COA1-209	ENST00000438444	3223	146aa	ENSP00000395586
COA1-219	ENST00000490251	2135	No protein	-
COA1-218	ENST00000488813	1641	No protein	-
COA1-203	ENST00000395879	2448	146aa	ENSP00000379218
COA1-202	ENST00000310564	1085	146aa	ENSP00000312100
COA1-201	ENST00000223336	899	146aa	ENSP00000223336
COA1-205	ENST00000415798	524	113aa	ENSP00000405582
COA1-208	ENST00000431651	720	88aa	ENSP00000417046
COA1-213	ENST00000451651	585	41aa	ENSP00000411540
COA1-206	ENST00000418140	1372	63aa	ENSP00000410365
COA1-215	ENST00000459713	574	No protein	-
COA1-212	ENST00000448704	1599	No protein	-
COA1-216	ENST00000470156	569	No protein	-
COA1-214	ENST00000457939	406	63aa	ENSP00000387433
COA1-207	ENST00000420441	547	No protein	-
COA1-217	ENST00000478504	552	No protein	-

Gene Model

Click here to download ENSG00000106603's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID
54429	Alpha-Globulins	3.3870000E-005	-

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSG00000106603's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0005515	enables protein binding	1	IPI	Homo_sapiens(9606)	Function
GO:0005739	located_in mitochondrion	1	IDA	Homo_sapiens(9606)	Component
GO:0005743	located_in mitochondrial inner membrane	2	IDA,TAS	Homo_sapiens(9606)	Component
GO:0005829	located_in cytosol	1	IDA	Homo_sapiens(9606)	Component
GO:0032981	involved_in mitochondrial respiratory chain complex I assembly	3	IBA,IMP,NAS	Homo_sapiens(9606)	Process
GO:0033617	involved_in mitochondrial cytochrome c oxidase assembly	2	IBA,IMP	Homo_sapiens(9606)	Process

Expression