RBP Type
Non-canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Metabolic enzyme
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000106268 Gene ID
4521
Accession
8048
Symbol
NUDT1
Alias
MTH1
Full Name
nudix hydrolase 1
Status
Confidence
Length
8920 bases
Strand
Plus strand
Position
7 : 2242226 - 2251145
RNA binding domain
N.A.
Summary
Misincorporation of oxidized nucleoside triphosphates into DNA/RNA during replication and transcription can cause mutations that may result in carcinogenesis or neurodegeneration. The protein encoded by this gene is an enzyme that hydrolyzes oxidized purine nucleoside triphosphates, such as 8-oxo-dGTP, 8-oxo-dATP, 2-hydroxy-dATP, and 2-hydroxy rATP, to monophosphates, thereby preventing misincorporation. The encoded protein is localized mainly in the cytoplasm, with some in the mitochondria, suggesting that it is involved in the sanitization of nucleotide pools both for nuclear and mitochondrial genomes. Several alternatively spliced transcript variants, some of which encode distinct isoforms, have been identified. Additional variants have been observed, but their full-length natures have not been determined. A rare single-nucleotide polymorphism that results in the production of an additional, longer isoform (p26) has been described. [provided by RefSeq, Dec 2018]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
NUDT1-203
ENST00000356714
658
156aa
ENSP00000349148
NUDT1-204
ENST00000397046
712
156aa
ENSP00000380239
NUDT1-205
ENST00000397048
783
179aa
ENSP00000380241
NUDT1-207
ENST00000454650
822
37aa
ENSP00000405334
NUDT1-201
ENST00000339737
698
156aa
ENSP00000343439
NUDT1-202
ENST00000343985
771
179aa
ENSP00000339503
NUDT1-206
ENST00000397049
714
156aa
ENSP00000380242
NUDT1-208
ENST00000471348
263
No protein
-
NUDT1-209
ENST00000487426
872
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0001669 located_in acrosomal vesicle 1 IEA Homo_sapiens(9606) Component GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005615 located_in extracellular space 1 IEA Homo_sapiens(9606) Component GO:0005634 located_in nucleus 1 IDA Homo_sapiens(9606) Component GO:0005737 is_active_in cytoplasm 2 IBA,IDA Homo_sapiens(9606) Component GO:0005739 located_in mitochondrion 1 IDA Homo_sapiens(9606) Component GO:0005759 located_in mitochondrial matrix 1 IDA Homo_sapiens(9606) Component GO:0005829 located_in cytosol 2 IDA,TAS Homo_sapiens(9606) Component GO:0006152 involved_in purine nucleoside catabolic process 1 IDA Homo_sapiens(9606) Process GO:0006281 involved_in DNA repair 1 IC Homo_sapiens(9606) Process GO:0006979 involved_in response to oxidative stress 1 TAS Homo_sapiens(9606) Process GO:0008413 enables 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity 2 IBA,IDA Homo_sapiens(9606) Function GO:0008584 involved_in male gonad development 1 IEA Homo_sapiens(9606) Process GO:0008828 enables dATP diphosphatase activity 1 IDA Homo_sapiens(9606) Function GO:0016818 enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1 IDA Homo_sapiens(9606) Function GO:0030515 enables snoRNA binding 1 ISS Homo_sapiens(9606) Function GO:0031965 located_in nuclear membrane 1 IEA Homo_sapiens(9606) Component GO:0035539 enables 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity 1 IDA Homo_sapiens(9606) Function GO:0042262 involved_in DNA protection 2 IBA,IDA Homo_sapiens(9606) Process GO:0046686 involved_in response to cadmium ion 1 IEA Homo_sapiens(9606) Process GO:0046872 enables metal ion binding 1 IEA Homo_sapiens(9606) Function GO:0047693 enables ATP diphosphatase activity 1 IDA Homo_sapiens(9606) Function GO:0106377 enables 2-hydroxy-ATP hydrolase activity 1 IDA Homo_sapiens(9606) Function GO:0106378 enables 2-hydroxy-dATP hydrolase activity 1 IDA Homo_sapiens(9606) Function GO:0106431 enables N6-methyl-(d)ATP hydrolase activity 1 IEA Homo_sapiens(9606) Function GO:0106433 enables O6-methyl-dGTP hydrolase activity 1 IEA Homo_sapiens(9606) Function GO:0140933 NOT enables 5-(N(7)-methylguanosine 5-triphospho)-[mRNA] hydrolase activity 1 ISS Homo_sapiens(9606) Function
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