Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000106268 Gene ID 4521 Accession 8048
Symbol NUDT1 Alias MTH1 Full Name nudix hydrolase 1
Status Confidence Length 8920 bases Strand Plus strand
Position 7 : 2242226 - 2251145 RNA binding domain N.A.
Summary Misincorporation of oxidized nucleoside triphosphates into DNA/RNA during replication and transcription can cause mutations that may result in carcinogenesis or neurodegeneration. The protein encoded by this gene is an enzyme that hydrolyzes oxidized purine nucleoside triphosphates, such as 8-oxo-dGTP, 8-oxo-dATP, 2-hydroxy-dATP, and 2-hydroxy rATP, to monophosphates, thereby preventing misincorporation. The encoded protein is localized mainly in the cytoplasm, with some in the mitochondria, suggesting that it is involved in the sanitization of nucleotide pools both for nuclear and mitochondrial genomes. Several alternatively spliced transcript variants, some of which encode distinct isoforms, have been identified. Additional variants have been observed, but their full-length natures have not been determined. A rare single-nucleotide polymorphism that results in the production of an additional, longer isoform (p26) has been described. [provided by RefSeq, Dec 2018]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
NUDT1-203 ENST00000356714 658 156aa ENSP00000349148
NUDT1-204 ENST00000397046 712 156aa ENSP00000380239
NUDT1-205 ENST00000397048 783 179aa ENSP00000380241
NUDT1-207 ENST00000454650 822 37aa ENSP00000405334
NUDT1-201 ENST00000339737 698 156aa ENSP00000343439
NUDT1-202 ENST00000343985 771 179aa ENSP00000339503
NUDT1-206 ENST00000397049 714 156aa ENSP00000380242
NUDT1-208 ENST00000471348 263 No protein -
NUDT1-209 ENST00000487426 872 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0001669located_in acrosomal vesicle1IEAHomo_sapiens(9606)Component
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005615located_in extracellular space1IEAHomo_sapiens(9606)Component
GO:0005634located_in nucleus1IDAHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm2IBA,IDAHomo_sapiens(9606)Component
GO:0005739located_in mitochondrion1IDAHomo_sapiens(9606)Component
GO:0005759located_in mitochondrial matrix1IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol2IDA,TASHomo_sapiens(9606)Component
GO:0006152involved_in purine nucleoside catabolic process1IDAHomo_sapiens(9606)Process
GO:0006281involved_in DNA repair1ICHomo_sapiens(9606)Process
GO:0006979involved_in response to oxidative stress1TASHomo_sapiens(9606)Process
GO:0008413enables 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity2IBA,IDAHomo_sapiens(9606)Function
GO:0008584involved_in male gonad development1IEAHomo_sapiens(9606)Process
GO:0008828enables dATP diphosphatase activity1IDAHomo_sapiens(9606)Function
GO:0016818enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides1IDAHomo_sapiens(9606)Function
GO:0030515enables snoRNA binding1ISSHomo_sapiens(9606)Function
GO:0031965located_in nuclear membrane1IEAHomo_sapiens(9606)Component
GO:0035539enables 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity1IDAHomo_sapiens(9606)Function
GO:0042262involved_in DNA protection2IBA,IDAHomo_sapiens(9606)Process
GO:0046686involved_in response to cadmium ion1IEAHomo_sapiens(9606)Process
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function
GO:0047693enables ATP diphosphatase activity1IDAHomo_sapiens(9606)Function
GO:0106377enables 2-hydroxy-ATP hydrolase activity1IDAHomo_sapiens(9606)Function
GO:0106378enables 2-hydroxy-dATP hydrolase activity1IDAHomo_sapiens(9606)Function
GO:0106431enables N6-methyl-(d)ATP hydrolase activity1IEAHomo_sapiens(9606)Function
GO:0106433enables O6-methyl-dGTP hydrolase activity1IEAHomo_sapiens(9606)Function
GO:0140933NOT enables 5-(N(7)-methylguanosine 5-triphospho)-[mRNA] hydrolase activity1ISSHomo_sapiens(9606)Function

Expression