RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
TF
Localizations
Nucleoli
BulkPerturb-seq
Ensembl ID ENSG00000104221 Gene ID
55290
Accession
17298
Symbol
BRF2
Alias
BRFU;TFIIIB50
Full Name
BRF2 RNA polymerase III transcription initiation factor subunit
Status
Confidence
Length
6594 bases
Strand
Minus strand
Position
8 : 37843268 - 37849861
RNA binding domain
TF_Zn_Ribbon
Summary
This gene encodes one of the multiple subunits of the RNA polymerase III transcription factor complex required for transcription of genes with promoter elements upstream of the initiation site. The product of this gene, a TFIIB-like factor, is directly recruited to the TATA-box of polymerase III small nuclear RNA gene promoters through its interaction with the TATA-binding protein. [provided by RefSeq, Jul 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000429554
TF_Zn_Ribbon
PF08271
3.4e-08
1
ENSP00000430193
TF_Zn_Ribbon
PF08271
3.4e-08
1
ENSP00000430107
TF_Zn_Ribbon
PF08271
1.9e-07
1
ENSP00000220659
TF_Zn_Ribbon
PF08271
5.2e-07
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
21518452
RNA polymerase III transcription in cancer: the BRF2 connection.
Stephanie Cabarcas
2011-04-25
Molecular cancer
17670747
The protein kinase CK2 phosphorylates SNAP190 to negatively regulate SNAPC DNA binding and human U6 transcription by RNA polymerase III.
Liping Gu
2007-09-21
The Journal of biological chemistry
35110532
Manipulation of RNA polymerase III by Herpes Simplex Virus-1.
E Sarah Dremel
2022-02-02
Nature communications
27378302
Heat*seq: an interactive web tool for high-throughput sequencing experiment comparison with public data.
Guillaume Devailly
2016-11-01
Bioinformatics (Oxford, England)
Name
Transcript ID
bp
Protein
Translation ID
BRF2-201
ENST00000220659
2560
419aa
ENSP00000220659
BRF2-202
ENST00000520601
1192
202aa
ENSP00000430107
BRF2-203
ENST00000521170
550
72aa
ENSP00000430193
BRF2-204
ENST00000522539
473
72aa
ENSP00000429554
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000126 part_of transcription factor TFIIIB complex 1 IMP Homo_sapiens(9606) Component GO:0001006 enables RNA polymerase III type 3 promoter sequence-specific DNA binding 1 IDA Homo_sapiens(9606) Function GO:0005634 is_active_in nucleus 1 IBA Homo_sapiens(9606) Component GO:0005654 located_in nucleoplasm 1 TAS Homo_sapiens(9606) Component GO:0006352 involved_in DNA-templated transcription initiation 1 IBA Homo_sapiens(9606) Process GO:0006359 involved_in regulation of transcription by RNA polymerase III 1 IMP Homo_sapiens(9606) Process GO:0017025 enables TBP-class protein binding 1 IBA Homo_sapiens(9606) Function GO:0034599 involved_in cellular response to oxidative stress 1 IMP Homo_sapiens(9606) Process GO:0046872 enables metal ion binding 1 IEA Homo_sapiens(9606) Function GO:0070897 involved_in transcription preinitiation complex assembly 1 IEA Homo_sapiens(9606) Process GO:0097550 part_of transcription preinitiation complex 1 IBA Homo_sapiens(9606) Component
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