Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations Stress granucleNucleoli
BulkPerturb-seq

Description

Ensembl ID ENSG00000103275 Gene ID 7329 Accession 12485
Symbol UBE2I Alias P18;UBC9;C358B7.1 Full Name ubiquitin conjugating enzyme E2 I
Status Confidence Length 18139 bases Strand Plus strand
Position 16 : 1308880 - 1327018 RNA binding domain N.A.
Summary The modification of proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ubiquitination involves at least three classes of enzymes: ubiquitin-activating enzymes, or E1s, ubiquitin-conjugating enzymes, or E2s, and ubiquitin-protein ligases, or E3s. This gene encodes a member of the E2 ubiquitin-conjugating enzyme family. Four alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
UBE2I-202 ENST00000355803 3253 158aa ENSP00000348056
UBE2I-201 ENST00000325437 2832 158aa ENSP00000324897
UBE2I-204 ENST00000397515 3109 158aa ENSP00000380650
UBE2I-208 ENST00000473256 1771 No protein -
UBE2I-203 ENST00000397514 2850 158aa ENSP00000380649
UBE2I-218 ENST00000568288 501 No protein -
UBE2I-216 ENST00000567383 3151 158aa ENSP00000456188
UBE2I-206 ENST00000403747 1217 158aa ENSP00000385009
UBE2I-217 ENST00000568209 266 No protein -
UBE2I-210 ENST00000562482 735 No protein -
UBE2I-222 ENST00000678584 718 No protein -
UBE2I-213 ENST00000566587 1098 158aa ENSP00000457064
UBE2I-207 ENST00000406620 3509 158aa ENSP00000384568
UBE2I-209 ENST00000562470 3131 158aa ENSP00000490882
UBE2I-223 ENST00000679082 1983 No protein -
UBE2I-215 ENST00000567074 3123 158aa ENSP00000455893
UBE2I-205 ENST00000402301 1708 184aa ENSP00000384361
UBE2I-214 ENST00000566775 410 74aa ENSP00000455252
UBE2I-220 ENST00000677314 3124 74aa ENSP00000503670
UBE2I-212 ENST00000566159 2642 No protein -
UBE2I-211 ENST00000564143 444 No protein -
UBE2I-224 ENST00000679137 2737 No protein -
UBE2I-221 ENST00000677987 5436 No protein -
UBE2I-219 ENST00000568989 3766 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
47576Intelligence Tests3.4072500E-005-
47948Child Development Disorders, Pervasive1.6251000E-005-
48191Child Development Disorders, Pervasive6.9944000E-006-
48978Child Development Disorders, Pervasive1.5126000E-005-

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000122involved_in negative regulation of transcription by RNA polymerase II2IMP,TASHomo_sapiens(9606)Process
GO:0000795located_in synaptonemal complex1TASHomo_sapiens(9606)Component
GO:0001221enables transcription coregulator binding1IPIHomo_sapiens(9606)Function
GO:0003723enables RNA binding1HDAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005524enables ATP binding1IEAHomo_sapiens(9606)Function
GO:0005634located_in nucleus3HDA,IBA,IDAHomo_sapiens(9606)Component
GO:0005635located_in nuclear envelope1TASHomo_sapiens(9606)Component
GO:0005643part_of nuclear pore1NASHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1TASHomo_sapiens(9606)Component
GO:0005737located_in cytoplasm1IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0006511involved_in ubiquitin-dependent protein catabolic process1TASHomo_sapiens(9606)Process
GO:0007059involved_in chromosome segregation1IEAHomo_sapiens(9606)Process
GO:0007084involved_in mitotic nuclear membrane reassembly1TASHomo_sapiens(9606)Process
GO:0008134enables transcription factor binding1IPIHomo_sapiens(9606)Function
GO:0016605located_in PML body1IDAHomo_sapiens(9606)Component
GO:0016925involved_in protein sumoylation5IBA,IDA,IEA,IMP,TASHomo_sapiens(9606)Process
GO:0019789enables SUMO transferase activity2EXP,TASHomo_sapiens(9606)Function
GO:0019899enables enzyme binding1IPIHomo_sapiens(9606)Function
GO:0030335involved_in positive regulation of cell migration1IMPHomo_sapiens(9606)Process
GO:0036211involved_in protein modification process1TASHomo_sapiens(9606)Process
GO:0043123involved_in positive regulation of I-kappaB kinase/NF-kappaB signaling1IEAHomo_sapiens(9606)Process
GO:0043398enables HLH domain binding1IEAHomo_sapiens(9606)Function
GO:0044388enables small protein activating enzyme binding1IPIHomo_sapiens(9606)Function
GO:0045892involved_in negative regulation of DNA-templated transcription1IDAHomo_sapiens(9606)Process
GO:0048471located_in perinuclear region of cytoplasm1IEAHomo_sapiens(9606)Component
GO:0051168involved_in nuclear export1EXPHomo_sapiens(9606)Process
GO:0051301involved_in cell division1IEAHomo_sapiens(9606)Process
GO:0061656enables SUMO conjugating enzyme activity2IBA,IDAHomo_sapiens(9606)Function
GO:0071535enables RING-like zinc finger domain binding1IPIHomo_sapiens(9606)Function
GO:0106068part_of SUMO ligase complex1IPIHomo_sapiens(9606)Component
GO:1903755involved_in positive regulation of SUMO transferase activity1IDAHomo_sapiens(9606)Process
GO:1990234part_of transferase complex1IDAHomo_sapiens(9606)Component

Expression