RBP Type
Non-canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
TF
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000100426 Gene ID
9889
Accession
20721
Symbol
ZBED4
Alias
NA
Full Name
zinc finger BED-type containing 4
Status
Confidence
Length
36237 bases
Strand
Plus strand
Position
22 : 49853844 - 49890080
RNA binding domain
N.A.
Summary
Enables identical protein binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Located in cytoplasm and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
22693546
Sequence-specific binding of recombinant Zbed4 to DNA: insights into Zbed4 participation in gene transcription and its association with other proteins.
V Vladislav Mokhonov
2012-01-01
PloS one
Name
Transcript ID
bp
Protein
Translation ID
ZBED4-201
ENST00000216268
6893
1171aa
ENSP00000216268
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
86268 Schizophrenia 2E-7 26198764
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000785 part_of chromatin 1 ISA Homo_sapiens(9606) Component GO:0000976 enables transcription cis-regulatory region binding 1 ISS Homo_sapiens(9606) Function GO:0000977 enables RNA polymerase II transcription regulatory region sequence-specific DNA binding 1 ISS Homo_sapiens(9606) Function GO:0000981 enables DNA-binding transcription factor activity, RNA polymerase II-specific 1 ISA Homo_sapiens(9606) Function GO:0001228 enables DNA-binding transcription activator activity, RNA polymerase II-specific 1 ISS Homo_sapiens(9606) Function GO:0001917 located_in photoreceptor inner segment 1 IEA Homo_sapiens(9606) Component GO:0003723 enables RNA binding 1 ISS Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005634 located_in nucleus 1 IDA Homo_sapiens(9606) Component GO:0005654 located_in nucleoplasm 1 IDA Homo_sapiens(9606) Component GO:0005737 located_in cytoplasm 1 IDA Homo_sapiens(9606) Component GO:0042802 enables identical protein binding 1 IPI Homo_sapiens(9606) Function GO:0045944 involved_in positive regulation of transcription by RNA polymerase II 1 ISS Homo_sapiens(9606) Process GO:0046872 enables metal ion binding 1 IEA Homo_sapiens(9606) Function GO:0046983 enables protein dimerization activity 1 IEA Homo_sapiens(9606) Function
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