RBP Type
Canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
E3 ligase
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000092098 Gene ID
55072
Accession
16031
Symbol
RNF31
Alias
HOIP;Paul;ZIBRA
Full Name
ring finger protein 31
Status
Confidence
Length
13978 bases
Strand
Plus strand
Position
14 : 24146683 - 24160660
RNA binding domain
zf-RanBP
Summary
The protein encoded by this gene contains a RING finger, a motif present in a variety of functionally distinct proteins and known to be involved in protein-DNA and protein-protein interactions. The encoded protein is the E3 ubiquitin-protein ligase component of the linear ubiquitin chain assembly complex. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2015]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000453601
zf-RanBP
PF00641
3.2e-06
1
ENSP00000453601
zf-RanBP
PF00641
3.2e-06
2
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
RNF31-225
ENST00000560875
550
56aa
ENSP00000454032
RNF31-212
ENST00000559308
559
52aa
ENSP00000453471
RNF31-207
ENST00000558634
537
No protein
-
RNF31-204
ENST00000557878
574
No protein
-
RNF31-216
ENST00000559533
3192
887aa
ENSP00000454048
RNF31-205
ENST00000557991
578
170aa
ENSP00000453423
RNF31-213
ENST00000559438
557
No protein
-
RNF31-220
ENST00000560071
576
60aa
ENSP00000453948
RNF31-211
ENST00000559275
3198
921aa
ENSP00000453574
RNF31-226
ENST00000699882
3948
No protein
-
RNF31-206
ENST00000558452
3623
No protein
-
RNF31-201
ENST00000324103
3502
1072aa
ENSP00000315112
RNF31-228
ENST00000699884
3744
No protein
-
RNF31-229
ENST00000699885
3451
1055aa
ENSP00000514674
RNF31-227
ENST00000699883
3879
No protein
-
RNF31-219
ENST00000559882
554
No protein
-
RNF31-210
ENST00000559260
551
32aa
ENSP00000453645
RNF31-230
ENST00000699886
3561
203aa
ENSP00000514675
RNF31-231
ENST00000699887
3407
286aa
ENSP00000514676
RNF31-208
ENST00000558907
1614
494aa
ENSP00000453601
RNF31-232
ENST00000699888
3544
No protein
-
RNF31-233
ENST00000699889
4054
No protein
-
RNF31-221
ENST00000560342
888
No protein
-
RNF31-234
ENST00000699890
2538
No protein
-
RNF31-235
ENST00000699891
4002
No protein
-
RNF31-224
ENST00000560787
2834
917aa
ENSP00000452972
RNF31-217
ENST00000559583
1147
No protein
-
RNF31-203
ENST00000491351
1957
623aa
ENSP00000453595
RNF31-209
ENST00000559071
1943
No protein
-
RNF31-223
ENST00000560754
606
No protein
-
RNF31-236
ENST00000699892
673
No protein
-
RNF31-214
ENST00000559449
808
140aa
ENSP00000454140
RNF31-202
ENST00000483895
660
143aa
ENSP00000453672
RNF31-218
ENST00000559719
579
165aa
ENSP00000452820
RNF31-215
ENST00000559491
478
No protein
-
RNF31-222
ENST00000560631
320
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
41426 Platelet Function Tests 1.6444800E-005 - 45248 Platelet Function Tests 1.0174524E-006 - 45289 Platelet Function Tests 1.1570719E-006 - 45366 Platelet Function Tests 8.0829820E-006 - 106561 Suicide 8E-6 26079190
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000209 involved_in protein polyubiquitination 1 IDA Homo_sapiens(9606) Process GO:0004842 enables ubiquitin-protein transferase activity 1 IDA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005829 located_in cytosol 1 TAS Homo_sapiens(9606) Component GO:0008270 enables zinc ion binding 1 IEA Homo_sapiens(9606) Function GO:0009898 located_in cytoplasmic side of plasma membrane 1 ISS Homo_sapiens(9606) Component GO:0023035 involved_in CD40 signaling pathway 1 ISS Homo_sapiens(9606) Process GO:0031625 enables ubiquitin protein ligase binding 1 IPI Homo_sapiens(9606) Function GO:0035631 part_of CD40 receptor complex 1 ISS Homo_sapiens(9606) Component GO:0036435 enables K48-linked polyubiquitin modification-dependent protein binding 1 IBA Homo_sapiens(9606) Function GO:0042742 involved_in defense response to bacterium 1 IDA Homo_sapiens(9606) Process GO:0042802 enables identical protein binding 1 IPI Homo_sapiens(9606) Function GO:0043123 involved_in positive regulation of I-kappaB kinase/NF-kappaB signaling 1 IDA Homo_sapiens(9606) Process GO:0043130 enables ubiquitin binding 1 IDA Homo_sapiens(9606) Function GO:0050852 involved_in T cell receptor signaling pathway 1 IDA Homo_sapiens(9606) Process GO:0051092 involved_in positive regulation of NF-kappaB transcription factor activity 1 IDA Homo_sapiens(9606) Process GO:0060546 involved_in negative regulation of necroptotic process 1 IEA Homo_sapiens(9606) Process GO:0061630 enables ubiquitin protein ligase activity 2 IBA,IDA Homo_sapiens(9606) Function GO:0070530 enables K63-linked polyubiquitin modification-dependent protein binding 1 IBA Homo_sapiens(9606) Function GO:0071797 part_of LUBAC complex 2 IDA,IPI Homo_sapiens(9606) Component GO:0097039 involved_in protein linear polyubiquitination 2 IBA,IDA Homo_sapiens(9606) Process GO:1903955 involved_in positive regulation of protein targeting to mitochondrion 1 HMP Homo_sapiens(9606) Process GO:1904417 involved_in positive regulation of xenophagy 1 IDA Homo_sapiens(9606) Process GO:1990450 enables linear polyubiquitin binding 1 IBA Homo_sapiens(9606) Function
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