Functions and Diseases

RBP Type Canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions E3 ligase
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000092098 Gene ID 55072 Accession 16031
Symbol RNF31 Alias HOIP;Paul;ZIBRA Full Name ring finger protein 31
Status Confidence Length 13978 bases Strand Plus strand
Position 14 : 24146683 - 24160660 RNA binding domain zf-RanBP
Summary The protein encoded by this gene contains a RING finger, a motif present in a variety of functionally distinct proteins and known to be involved in protein-DNA and protein-protein interactions. The encoded protein is the E3 ubiquitin-protein ligase component of the linear ubiquitin chain assembly complex. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2015]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000453601 zf-RanBP PF00641 3.2e-06 1
ENSP00000453601 zf-RanBP PF00641 3.2e-06 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
RNF31-225 ENST00000560875 550 56aa ENSP00000454032
RNF31-212 ENST00000559308 559 52aa ENSP00000453471
RNF31-207 ENST00000558634 537 No protein -
RNF31-204 ENST00000557878 574 No protein -
RNF31-216 ENST00000559533 3192 887aa ENSP00000454048
RNF31-205 ENST00000557991 578 170aa ENSP00000453423
RNF31-213 ENST00000559438 557 No protein -
RNF31-220 ENST00000560071 576 60aa ENSP00000453948
RNF31-211 ENST00000559275 3198 921aa ENSP00000453574
RNF31-226 ENST00000699882 3948 No protein -
RNF31-206 ENST00000558452 3623 No protein -
RNF31-201 ENST00000324103 3502 1072aa ENSP00000315112
RNF31-228 ENST00000699884 3744 No protein -
RNF31-229 ENST00000699885 3451 1055aa ENSP00000514674
RNF31-227 ENST00000699883 3879 No protein -
RNF31-219 ENST00000559882 554 No protein -
RNF31-210 ENST00000559260 551 32aa ENSP00000453645
RNF31-230 ENST00000699886 3561 203aa ENSP00000514675
RNF31-231 ENST00000699887 3407 286aa ENSP00000514676
RNF31-208 ENST00000558907 1614 494aa ENSP00000453601
RNF31-232 ENST00000699888 3544 No protein -
RNF31-233 ENST00000699889 4054 No protein -
RNF31-221 ENST00000560342 888 No protein -
RNF31-234 ENST00000699890 2538 No protein -
RNF31-235 ENST00000699891 4002 No protein -
RNF31-224 ENST00000560787 2834 917aa ENSP00000452972
RNF31-217 ENST00000559583 1147 No protein -
RNF31-203 ENST00000491351 1957 623aa ENSP00000453595
RNF31-209 ENST00000559071 1943 No protein -
RNF31-223 ENST00000560754 606 No protein -
RNF31-236 ENST00000699892 673 No protein -
RNF31-214 ENST00000559449 808 140aa ENSP00000454140
RNF31-202 ENST00000483895 660 143aa ENSP00000453672
RNF31-218 ENST00000559719 579 165aa ENSP00000452820
RNF31-215 ENST00000559491 478 No protein -
RNF31-222 ENST00000560631 320 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
41426Platelet Function Tests1.6444800E-005-
45248Platelet Function Tests1.0174524E-006-
45289Platelet Function Tests1.1570719E-006-
45366Platelet Function Tests8.0829820E-006-
106561Suicide8E-626079190

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000209involved_in protein polyubiquitination1IDAHomo_sapiens(9606)Process
GO:0004842enables ubiquitin-protein transferase activity1IDAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0008270enables zinc ion binding1IEAHomo_sapiens(9606)Function
GO:0009898located_in cytoplasmic side of plasma membrane1ISSHomo_sapiens(9606)Component
GO:0023035involved_in CD40 signaling pathway1ISSHomo_sapiens(9606)Process
GO:0031625enables ubiquitin protein ligase binding1IPIHomo_sapiens(9606)Function
GO:0035631part_of CD40 receptor complex1ISSHomo_sapiens(9606)Component
GO:0036435enables K48-linked polyubiquitin modification-dependent protein binding1IBAHomo_sapiens(9606)Function
GO:0042742involved_in defense response to bacterium1IDAHomo_sapiens(9606)Process
GO:0042802enables identical protein binding1IPIHomo_sapiens(9606)Function
GO:0043123involved_in positive regulation of I-kappaB kinase/NF-kappaB signaling1IDAHomo_sapiens(9606)Process
GO:0043130enables ubiquitin binding1IDAHomo_sapiens(9606)Function
GO:0050852involved_in T cell receptor signaling pathway1IDAHomo_sapiens(9606)Process
GO:0051092involved_in positive regulation of NF-kappaB transcription factor activity1IDAHomo_sapiens(9606)Process
GO:0060546involved_in negative regulation of necroptotic process1IEAHomo_sapiens(9606)Process
GO:0061630enables ubiquitin protein ligase activity2IBA,IDAHomo_sapiens(9606)Function
GO:0070530enables K63-linked polyubiquitin modification-dependent protein binding1IBAHomo_sapiens(9606)Function
GO:0071797part_of LUBAC complex2IDA,IPIHomo_sapiens(9606)Component
GO:0097039involved_in protein linear polyubiquitination2IBA,IDAHomo_sapiens(9606)Process
GO:1903955involved_in positive regulation of protein targeting to mitochondrion1HMPHomo_sapiens(9606)Process
GO:1904417involved_in positive regulation of xenophagy1IDAHomo_sapiens(9606)Process
GO:1990450enables linear polyubiquitin binding1IBAHomo_sapiens(9606)Function

Expression