Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions E3 ligase
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000089053 Gene ID 51433 Accession 15713
Symbol ANAPC5 Alias APC5 Full Name anaphase promoting complex subunit 5
Status Confidence Length 91652 bases Strand Minus strand
Position 12 : 121308245 - 121399896 RNA binding domain ANAPC5
Summary This gene encodes a tetratricopeptide repeat-containing component of the anaphase promoting complex/cyclosome (APC/C), a large E3 ubiquitin ligase that controls cell cycle progression by targeting a number of cell cycle regulators such as B-type cyclins for 26S proteasome-mediated degradation through ubiquitination. The encoded protein is required for the proper ubiquitination function of APC/C and for the interaction of APC/C with transcription coactivators. It also interacts with polyA binding protein and represses internal ribosome entry site-mediated translation. Multiple transcript variants encoding different isoforms have been found for this gene. These differences cause translation initiation at a downstream AUG and result in a shorter protein (isoform b), compared to isoform a. [provided by RefSeq, Nov 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000437857 ANAPC5 PF12862 4.9e-33 1
ENSP00000437857 ANAPC5 PF12862 4.9e-33 2
ENSP00000415061 ANAPC5 PF12862 6e-33 1
ENSP00000415061 ANAPC5 PF12862 6e-33 2
ENSP00000439875 ANAPC5 PF12862 1e-32 1
ENSP00000439875 ANAPC5 PF12862 1e-32 2
ENSP00000261819 ANAPC5 PF12862 1.1e-32 1
ENSP00000261819 ANAPC5 PF12862 1.1e-32 2
ENSP00000440800 ANAPC5 PF12862 1.1e-12 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
ANAPC5-203 ENST00000422342 1141 No protein -
ANAPC5-209 ENST00000535641 2627 No protein -
ANAPC5-214 ENST00000539079 1715 396aa ENSP00000437857
ANAPC5-204 ENST00000441917 2147 643aa ENSP00000415061
ANAPC5-205 ENST00000534976 3165 No protein -
ANAPC5-218 ENST00000541887 2400 742aa ENSP00000439875
ANAPC5-201 ENST00000261819 2574 755aa ENSP00000261819
ANAPC5-208 ENST00000535482 2077 421aa ENSP00000438754
ANAPC5-219 ENST00000544314 1508 No protein -
ANAPC5-221 ENST00000545218 1328 No protein -
ANAPC5-202 ENST00000366333 923 No protein -
ANAPC5-207 ENST00000535472 1048 No protein -
ANAPC5-213 ENST00000538334 6149 No protein -
ANAPC5-206 ENST00000535463 265 No protein -
ANAPC5-212 ENST00000538223 292 No protein -
ANAPC5-215 ENST00000539612 654 No protein -
ANAPC5-217 ENST00000541652 753 No protein -
ANAPC5-220 ENST00000544442 915 217aa ENSP00000440800
ANAPC5-210 ENST00000536416 677 No protein -
ANAPC5-216 ENST00000539871 704 216aa ENSP00000445191
ANAPC5-211 ENST00000536837 509 44aa ENSP00000441508
ANAPC5-222 ENST00000545801 1281 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005634located_in nucleus1IDAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1TASHomo_sapiens(9606)Component
GO:0005680part_of anaphase-promoting complex4IBA,IDA,IPI,NASHomo_sapiens(9606)Component
GO:0005819located_in spindle1IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0007049involved_in cell cycle1IEAHomo_sapiens(9606)Process
GO:0007346involved_in regulation of mitotic cell cycle1NASHomo_sapiens(9606)Process
GO:0019903enables protein phosphatase binding1IPIHomo_sapiens(9606)Function
GO:0031145involved_in anaphase-promoting complex-dependent catabolic process2IBA,NASHomo_sapiens(9606)Process
GO:0045842involved_in positive regulation of mitotic metaphase/anaphase transition1IBAHomo_sapiens(9606)Process
GO:0051301involved_in cell division1IEAHomo_sapiens(9606)Process
GO:0051445involved_in regulation of meiotic cell cycle1NASHomo_sapiens(9606)Process
GO:0070979involved_in protein K11-linked ubiquitination2IBA,IDAHomo_sapiens(9606)Process

Expression