RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
E3 ligase
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000089053 Gene ID
51433
Accession
15713
Symbol
ANAPC5
Alias
APC5
Full Name
anaphase promoting complex subunit 5
Status
Confidence
Length
91652 bases
Strand
Minus strand
Position
12 : 121308245 - 121399896
RNA binding domain
ANAPC5
Summary
This gene encodes a tetratricopeptide repeat-containing component of the anaphase promoting complex/cyclosome (APC/C), a large E3 ubiquitin ligase that controls cell cycle progression by targeting a number of cell cycle regulators such as B-type cyclins for 26S proteasome-mediated degradation through ubiquitination. The encoded protein is required for the proper ubiquitination function of APC/C and for the interaction of APC/C with transcription coactivators. It also interacts with polyA binding protein and represses internal ribosome entry site-mediated translation. Multiple transcript variants encoding different isoforms have been found for this gene. These differences cause translation initiation at a downstream AUG and result in a shorter protein (isoform b), compared to isoform a. [provided by RefSeq, Nov 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000437857
ANAPC5
PF12862
4.9e-33
1
ENSP00000437857
ANAPC5
PF12862
4.9e-33
2
ENSP00000415061
ANAPC5
PF12862
6e-33
1
ENSP00000415061
ANAPC5
PF12862
6e-33
2
ENSP00000439875
ANAPC5
PF12862
1e-32
1
ENSP00000439875
ANAPC5
PF12862
1e-32
2
ENSP00000261819
ANAPC5
PF12862
1.1e-32
1
ENSP00000261819
ANAPC5
PF12862
1.1e-32
2
ENSP00000440800
ANAPC5
PF12862
1.1e-12
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
ANAPC5-203
ENST00000422342
1141
No protein
-
ANAPC5-209
ENST00000535641
2627
No protein
-
ANAPC5-214
ENST00000539079
1715
396aa
ENSP00000437857
ANAPC5-204
ENST00000441917
2147
643aa
ENSP00000415061
ANAPC5-205
ENST00000534976
3165
No protein
-
ANAPC5-218
ENST00000541887
2400
742aa
ENSP00000439875
ANAPC5-201
ENST00000261819
2574
755aa
ENSP00000261819
ANAPC5-208
ENST00000535482
2077
421aa
ENSP00000438754
ANAPC5-219
ENST00000544314
1508
No protein
-
ANAPC5-221
ENST00000545218
1328
No protein
-
ANAPC5-202
ENST00000366333
923
No protein
-
ANAPC5-207
ENST00000535472
1048
No protein
-
ANAPC5-213
ENST00000538334
6149
No protein
-
ANAPC5-206
ENST00000535463
265
No protein
-
ANAPC5-212
ENST00000538223
292
No protein
-
ANAPC5-215
ENST00000539612
654
No protein
-
ANAPC5-217
ENST00000541652
753
No protein
-
ANAPC5-220
ENST00000544442
915
217aa
ENSP00000440800
ANAPC5-210
ENST00000536416
677
No protein
-
ANAPC5-216
ENST00000539871
704
216aa
ENSP00000445191
ANAPC5-211
ENST00000536837
509
44aa
ENSP00000441508
ANAPC5-222
ENST00000545801
1281
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005634 located_in nucleus 1 IDA Homo_sapiens(9606) Component GO:0005654 located_in nucleoplasm 1 TAS Homo_sapiens(9606) Component GO:0005680 part_of anaphase-promoting complex 4 IBA,IDA,IPI,NAS Homo_sapiens(9606) Component GO:0005819 located_in spindle 1 IDA Homo_sapiens(9606) Component GO:0005829 located_in cytosol 1 TAS Homo_sapiens(9606) Component GO:0007049 involved_in cell cycle 1 IEA Homo_sapiens(9606) Process GO:0007346 involved_in regulation of mitotic cell cycle 1 NAS Homo_sapiens(9606) Process GO:0019903 enables protein phosphatase binding 1 IPI Homo_sapiens(9606) Function GO:0031145 involved_in anaphase-promoting complex-dependent catabolic process 2 IBA,NAS Homo_sapiens(9606) Process GO:0045842 involved_in positive regulation of mitotic metaphase/anaphase transition 1 IBA Homo_sapiens(9606) Process GO:0051301 involved_in cell division 1 IEA Homo_sapiens(9606) Process GO:0051445 involved_in regulation of meiotic cell cycle 1 NAS Homo_sapiens(9606) Process GO:0070979 involved_in protein K11-linked ubiquitination 2 IBA,IDA Homo_sapiens(9606) Process
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