RBP Type
Non-canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Metabolic enzyme
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000083720 Gene ID
5019
Accession
8527
Symbol
OXCT1
Alias
OXCT;SCOT
Full Name
3-oxoacid CoA-transferase 1
Status
Confidence
Length
140361 bases
Strand
Minus strand
Position
5 : 41730065 - 41870425
RNA binding domain
N.A.
Summary
This gene encodes a member of the 3-oxoacid CoA-transferase gene family. The encoded protein is a homodimeric mitochondrial matrix enzyme that plays a central role in extrahepatic ketone body catabolism by catalyzing the reversible transfer of coenzyme A from succinyl-CoA to acetoacetate. Mutations in this gene are associated with succinyl CoA:3-oxoacid CoA transferase deficiency. [provided by RefSeq, Jul 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
OXCT1-201
ENST00000196371
3294
520aa
ENSP00000196371
OXCT1-206
ENST00000512084
1593
123aa
ENSP00000421143
OXCT1-205
ENST00000510634
1441
123aa
ENSP00000423144
OXCT1-204
ENST00000509987
1441
334aa
ENSP00000425348
OXCT1-203
ENST00000508557
596
No protein
-
OXCT1-202
ENST00000503374
364
No protein
-
OXCT1-207
ENST00000513081
350
No protein
-
OXCT1-208
ENST00000514723
241
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
9771 Echocardiography 1.10366259186344E-6 17903301 50455 Child Development Disorders, Pervasive 2.5898000E-005 - 54809 Insulin-Like Growth Factor I 2.8740000E-005 - 54835 Insulin-Like Growth Factor I 2.0980000E-005 - 54840 Insulin-Like Growth Factor I 2.9520000E-005 -
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005739 is_active_in mitochondrion 3 IBA,IDA,NAS Homo_sapiens(9606) Component GO:0005759 located_in mitochondrial matrix 1 TAS Homo_sapiens(9606) Component GO:0008260 enables succinyl-CoA:3-oxo-acid CoA-transferase activity 2 IBA,IMP Homo_sapiens(9606) Function GO:0042182 involved_in ketone catabolic process 1 IEA Homo_sapiens(9606) Process GO:0046950 involved_in cellular ketone body metabolic process 2 IBA,IMP Homo_sapiens(9606) Process GO:0046952 involved_in ketone body catabolic process 1 IEA Homo_sapiens(9606) Process
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