RBP Type
Canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Kinase
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000083290 Gene ID
9706
Accession
13480
Symbol
ULK2
Alias
ATG1B;Unc51.2
Full Name
unc-51 like autophagy activating kinase 2
Status
Confidence
Length
97107 bases
Strand
Minus strand
Position
17 : 19770830 - 19867936
RNA binding domain
RIO1
Summary
This gene encodes a protein that is similar to a serine/threonine kinase in C. elegans which is involved in axonal elongation. The structure of this protein is similar to the C. elegans protein in that both proteins have an N-terminal kinase domain, a central proline/serine rich (PS) domain, and a C-terminal (C) domain. The gene is located within the Smith-Magenis syndrome region on chromosome 17. Alternatively spliced transcript variants encoding the same protein have been identified. [provided by RefSeq, Dec 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000354877
RIO1
PF01163
0.00012
1
ENSP00000378914
RIO1
PF01163
0.00012
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
ULK2-203
ENST00000570983
3096
No protein
-
ULK2-201
ENST00000361658
3908
1036aa
ENSP00000354877
ULK2-202
ENST00000395544
9149
1036aa
ENSP00000378914
ULK2-206
ENST00000571454
562
No protein
-
ULK2-209
ENST00000575432
594
198aa
ENSP00000464892
ULK2-204
ENST00000571137
615
No protein
-
ULK2-211
ENST00000580130
627
No protein
-
ULK2-208
ENST00000574854
493
No protein
-
ULK2-205
ENST00000571177
492
No protein
-
ULK2-207
ENST00000574732
564
21aa
ENSP00000465666
ULK2-210
ENST00000580118
577
49aa
ENSP00000467277
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
179 Parkinson Disease 2.505542E-5 17052657
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000045 involved_in autophagosome assembly 1 IBA Homo_sapiens(9606) Process GO:0000407 is_active_in phagophore assembly site 1 IBA Homo_sapiens(9606) Component GO:0000422 involved_in autophagy of mitochondrion 1 IBA Homo_sapiens(9606) Process GO:0004674 enables protein serine/threonine kinase activity 2 IBA,IDA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005524 enables ATP binding 1 IEA Homo_sapiens(9606) Function GO:0005737 is_active_in cytoplasm 1 IBA Homo_sapiens(9606) Component GO:0005776 is_active_in autophagosome 1 IBA Homo_sapiens(9606) Component GO:0005829 is_active_in cytosol 1 IBA Homo_sapiens(9606) Component GO:0006914 involved_in autophagy 2 IDA,IGI Homo_sapiens(9606) Process GO:0007165 involved_in signal transduction 1 IEA Homo_sapiens(9606) Process GO:0010508 involved_in positive regulation of autophagy 1 IBA Homo_sapiens(9606) Process GO:0018105 involved_in peptidyl-serine phosphorylation 1 IBA Homo_sapiens(9606) Process GO:0030659 located_in cytoplasmic vesicle membrane 1 IEA Homo_sapiens(9606) Component GO:0034045 is_active_in phagophore assembly site membrane 2 IBA,IDA Homo_sapiens(9606) Component GO:0034727 involved_in piecemeal microautophagy of the nucleus 1 IBA Homo_sapiens(9606) Process GO:0042594 involved_in response to starvation 2 IBA,ISS Homo_sapiens(9606) Process GO:0044805 involved_in late nucleophagy 1 IBA Homo_sapiens(9606) Process GO:0046777 involved_in protein autophosphorylation 2 IBA,IDA Homo_sapiens(9606) Process GO:0048668 involved_in collateral sprouting 1 IEA Homo_sapiens(9606) Process GO:0048671 involved_in negative regulation of collateral sprouting 1 IBA Homo_sapiens(9606) Process GO:0048675 involved_in axon extension 1 IBA Homo_sapiens(9606) Process GO:0061709 involved_in reticulophagy 1 IBA Homo_sapiens(9606) Process GO:0106310 enables protein serine kinase activity 1 IEA Homo_sapiens(9606) Function
Copyright © 2023, Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.