RBP Type
Non-canonical_RBPs
Diseases
N.A.
Drug
Drug
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000082781 Gene ID
3693
Accession
6160
Symbol
ITGB5
Alias
NA
Full Name
integrin subunit beta 5
Status
Confidence
Length
139471 bases
Strand
Minus strand
Position
3 : 124761948 - 124901418
RNA binding domain
N.A.
Summary
This gene encodes a beta subunit of integrin, which can combine with different alpha chains to form a variety of integrin heterodimers. Integrins are integral cell-surface receptors that participate in cell adhesion as well as cell-surface mediated signaling. The alphav beta5 integrin is involved in adhesion to vitronectin. [provided by RefSeq, Aug 2017]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
ITGB5-201
ENST00000296181
4440
799aa
ENSP00000296181
ITGB5-202
ENST00000460797
2228
No protein
-
ITGB5-203
ENST00000461306
577
No protein
-
ITGB5-207
ENST00000481591
1202
401aa
ENSP00000420814
ITGB5-209
ENST00000488466
971
323aa
ENSP00000477446
ITGB5-205
ENST00000474838
475
No protein
-
ITGB5-210
ENST00000496703
789
263aa
ENSP00000418367
ITGB5-206
ENST00000476988
492
No protein
-
ITGB5-204
ENST00000465464
1164
40aa
ENSP00000418079
ITGB5-212
ENST00000608657
825
139aa
ENSP00000477230
ITGB5-208
ENST00000483168
576
79aa
ENSP00000419198
ITGB5-211
ENST00000608107
548
59aa
ENSP00000476655
ITGB5-213
ENST00000608945
267
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0001618 enables virus receptor activity 1 IEA Homo_sapiens(9606) Function GO:0005178 enables integrin binding 1 IBA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005886 located_in plasma membrane 1 TAS Homo_sapiens(9606) Component GO:0005925 located_in focal adhesion 2 HDA,IBA Homo_sapiens(9606) Component GO:0007160 involved_in cell-matrix adhesion 2 IBA,IMP Homo_sapiens(9606) Process GO:0007179 involved_in transforming growth factor beta receptor signaling pathway 1 IMP Homo_sapiens(9606) Process GO:0007229 involved_in integrin-mediated signaling pathway 2 IBA,IMP Homo_sapiens(9606) Process GO:0008305 part_of integrin complex 1 IBA Homo_sapiens(9606) Component GO:0009986 located_in cell surface 3 HDA,IBA,IDA Homo_sapiens(9606) Component GO:0016477 involved_in cell migration 2 IBA,IMP Homo_sapiens(9606) Process GO:0033627 involved_in cell adhesion mediated by integrin 1 IBA Homo_sapiens(9606) Process GO:0034684 part_of integrin alphav-beta5 complex 1 IDA Homo_sapiens(9606) Component GO:0035987 involved_in endodermal cell differentiation 1 IEP Homo_sapiens(9606) Process GO:0043149 involved_in stress fiber assembly 1 IMP Homo_sapiens(9606) Process GO:0043235 part_of receptor complex 1 IDA Homo_sapiens(9606) Component GO:0045335 located_in phagocytic vesicle 1 TAS Homo_sapiens(9606) Component GO:0046718 involved_in viral entry into host cell 1 IEA Homo_sapiens(9606) Process GO:0070062 located_in extracellular exosome 1 HDA Homo_sapiens(9606) Component GO:0090136 involved_in epithelial cell-cell adhesion 1 IMP Homo_sapiens(9606) Process
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