RBP Type
Canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
E3 ligase
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000080561 Gene ID
11043
Accession
7096
Symbol
MID2
Alias
FXY2;RNF60;TRIM1;MRX101;XLID101
Full Name
midline 2
Status
Confidence
Length
105883 bases
Strand
Plus strand
Position
X : 107825755 - 107931637
RNA binding domain
SPRY
Summary
The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The protein localizes to microtubular structures in the cytoplasm. Alternate splicing of this gene results in two transcript variants encoding different isoforms. [provided by RefSeq, Feb 2009]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000413976
SPRY
PF00622
3e-10
1
ENSP00000262843
SPRY
PF00622
3.2e-10
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
MID2-203
ENST00000451923
758
218aa
ENSP00000410730
MID2-201
ENST00000262843
7333
735aa
ENSP00000262843
MID2-202
ENST00000443968
2251
705aa
ENSP00000413976
MID2-204
ENST00000474517
689
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
4653 Cholesterol 1.72200971455582E-6 17903299
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0003713 enables transcription coactivator activity 1 IDA Homo_sapiens(9606) Function GO:0005737 located_in cytoplasm 1 IEA Homo_sapiens(9606) Component GO:0005874 colocalizes_with microtubule 3 IBA,IDA Homo_sapiens(9606) Component GO:0008017 enables microtubule binding 2 IBA,IMP Homo_sapiens(9606) Function GO:0008270 enables zinc ion binding 1 IEA Homo_sapiens(9606) Function GO:0010508 involved_in positive regulation of autophagy 1 IMP Homo_sapiens(9606) Process GO:0016567 involved_in protein ubiquitination 1 IEA Homo_sapiens(9606) Process GO:0016740 enables transferase activity 1 IEA Homo_sapiens(9606) Function GO:0019899 enables enzyme binding 1 IPI Homo_sapiens(9606) Function GO:0032897 involved_in negative regulation of viral transcription 1 IDA Homo_sapiens(9606) Process GO:0035372 involved_in protein localization to microtubule 2 IBA,IMP Homo_sapiens(9606) Process GO:0042803 enables protein homodimerization activity 1 IDA Homo_sapiens(9606) Function GO:0043123 involved_in positive regulation of I-kappaB kinase/NF-kappaB signaling 1 IDA Homo_sapiens(9606) Process GO:0044790 involved_in suppression of viral release by host 1 IDA Homo_sapiens(9606) Process GO:0045087 involved_in innate immune response 1 IDA Homo_sapiens(9606) Process GO:0045893 involved_in positive regulation of DNA-templated transcription 1 IEA Homo_sapiens(9606) Process GO:0046597 involved_in negative regulation of viral entry into host cell 1 IDA Homo_sapiens(9606) Process GO:0051091 involved_in positive regulation of DNA-binding transcription factor activity 1 IMP Homo_sapiens(9606) Process GO:0051092 involved_in positive regulation of NF-kappaB transcription factor activity 1 IMP Homo_sapiens(9606) Process GO:0051219 enables phosphoprotein binding 1 IPI Homo_sapiens(9606) Function GO:0070062 located_in extracellular exosome 1 HDA Homo_sapiens(9606) Component
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