Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000078124 Gene ID 55331 Accession 16066
Symbol ACER3 Alias APHC;PHCA;PLDECO Full Name alkaline ceramidase 3
Status Confidence Length 165939 bases Strand Plus strand
Position 11 : 76860859 - 77026797 RNA binding domain N.A.
Summary Enables N-acylsphingosine amidohydrolase activity and metal ion binding activity. Involved in several processes, including myelination; positive regulation of cell population proliferation; and sphingolipid metabolic process. Is integral component of Golgi membrane and integral component of endoplasmic reticulum membrane. Biomarker of hepatocellular carcinoma and non-alcoholic steatohepatitis. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
ACER3-216 ENST00000679754 4495 274aa ENSP00000505416
ACER3-214 ENST00000534206 834 205aa ENSP00000435733
ACER3-219 ENST00000679866 4509 165aa ENSP00000505175
ACER3-225 ENST00000680842 4569 80aa ENSP00000506534
ACER3-228 ENST00000681257 4527 179aa ENSP00000506160
ACER3-230 ENST00000681354 4310 74aa ENSP00000505846
ACER3-234 ENST00000681732 4551 71aa ENSP00000504927
ACER3-223 ENST00000680583 4533 172aa ENSP00000505842
ACER3-212 ENST00000532485 7333 267aa ENSP00000434480
ACER3-202 ENST00000525194 846 51aa ENSP00000432109
ACER3-226 ENST00000681004 4437 74aa ENSP00000505132
ACER3-231 ENST00000681375 4735 71aa ENSP00000506417
ACER3-207 ENST00000530182 1695 No protein -
ACER3-204 ENST00000525861 2058 80aa ENSP00000432379
ACER3-211 ENST00000531461 1292 74aa ENSP00000433368
ACER3-215 ENST00000679611 4629 No protein -
ACER3-232 ENST00000681411 4938 200aa ENSP00000504918
ACER3-235 ENST00000681955 4768 71aa ENSP00000505191
ACER3-205 ENST00000526597 1269 172aa ENSP00000431149
ACER3-220 ENST00000679924 4418 112aa ENSP00000506405
ACER3-208 ENST00000530334 1491 150aa ENSP00000435048
ACER3-227 ENST00000681251 4461 150aa ENSP00000505549
ACER3-213 ENST00000533873 929 230aa ENSP00000436252
ACER3-210 ENST00000531352 2093 51aa ENSP00000431504
ACER3-201 ENST00000278544 3500 76aa ENSP00000278544
ACER3-222 ENST00000680351 4661 No protein -
ACER3-233 ENST00000681591 817 No protein -
ACER3-206 ENST00000527508 4152 No protein -
ACER3-229 ENST00000681258 5048 No protein -
ACER3-203 ENST00000525325 560 No protein -
ACER3-221 ENST00000680164 3215 No protein -
ACER3-217 ENST00000679759 5440 No protein -
ACER3-218 ENST00000679813 3424 No protein -
ACER3-224 ENST00000680624 5366 No protein -
ACER3-209 ENST00000530921 567 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
9660Echocardiography7.94676133021755E-517903301
33366Urine7.3688249E-005-

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000139located_in Golgi membrane1IDAHomo_sapiens(9606)Component
GO:0005509enables calcium ion binding1IDAHomo_sapiens(9606)Function
GO:0005789located_in endoplasmic reticulum membrane2IDA,TASHomo_sapiens(9606)Component
GO:0006954involved_in inflammatory response1IEAHomo_sapiens(9606)Process
GO:0008270enables zinc ion binding1IDAHomo_sapiens(9606)Function
GO:0008284involved_in positive regulation of cell population proliferation1IMPHomo_sapiens(9606)Process
GO:0016020located_in membrane1IDAHomo_sapiens(9606)Component
GO:0017040enables N-acylsphingosine amidohydrolase activity2IDA,IMPHomo_sapiens(9606)Function
GO:0030148involved_in sphingolipid biosynthetic process1TASHomo_sapiens(9606)Process
GO:0042552involved_in myelination1IMPHomo_sapiens(9606)Process
GO:0043067involved_in regulation of programmed cell death1IDAHomo_sapiens(9606)Process
GO:0046512involved_in sphingosine biosynthetic process2IDA,IMPHomo_sapiens(9606)Process
GO:0046514involved_in ceramide catabolic process2IDA,IMPHomo_sapiens(9606)Process
GO:0070774enables phytoceramidase activity4IBA,IDA,IMP,TASHomo_sapiens(9606)Function
GO:0071602involved_in phytosphingosine biosynthetic process2IBA,IDAHomo_sapiens(9606)Process
GO:0071633enables dihydroceramidase activity2IDA,IMPHomo_sapiens(9606)Function
GO:0102121enables ceramidase activity1IEAHomo_sapiens(9606)Function

Expression