RBP Type
Canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Transmemebrane
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000072682 Gene ID
8974
Accession
8547
Symbol
P4HA2
Alias
MYP25;lncRNA-PE
Full Name
prolyl 4-hydroxylase subunit alpha 2
Status
Confidence
Length
105125 bases
Strand
Minus strand
Position
5 : 132190147 - 132295271
RNA binding domain
2OG-FeII_Oxy
Summary
This gene encodes a component of prolyl 4-hydroxylase, a key enzyme in collagen synthesis composed of two identical alpha subunits and two beta subunits. The encoded protein is one of several different types of alpha subunits and provides the major part of the catalytic site of the active enzyme. In collagen and related proteins, prolyl 4-hydroxylase catalyzes the formation of 4-hydroxyproline that is essential to the proper three-dimensional folding of newly synthesized procollagen chains. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jul 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000166534
2OG-FeII_Oxy
PF03171
2.3e-05
1
ENSP00000368398
2OG-FeII_Oxy
PF03171
2.3e-05
1
ENSP00000384999
2OG-FeII_Oxy
PF03171
2.3e-05
1
ENSP00000353772
2OG-FeII_Oxy
PF03171
2.9e-05
1
ENSP00000368379
2OG-FeII_Oxy
PF03171
2.9e-05
1
ENSP00000368394
2OG-FeII_Oxy
PF03171
2.9e-05
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
31278071
Aspirin targets P4HA2 through inhibiting NF-κB and LMCD1-AS1/let-7g to inhibit tumour growth and collagen deposition in hepatocellular carcinoma.
Tianjiao Wang
2019-07-01
EBioMedicine
Name
Transcript ID
bp
Protein
Translation ID
P4HA2-202
ENST00000360568
4547
533aa
ENSP00000353772
P4HA2-205
ENST00000379104
4553
535aa
ENSP00000368398
P4HA2-207
ENST00000401867
3349
535aa
ENSP00000384999
P4HA2-203
ENST00000379086
2223
533aa
ENSP00000368379
P4HA2-201
ENST00000166534
2230
535aa
ENSP00000166534
P4HA2-204
ENST00000379100
2625
533aa
ENSP00000368394
P4HA2-218
ENST00000474628
743
No protein
-
P4HA2-211
ENST00000428369
2397
146aa
ENSP00000396495
P4HA2-221
ENST00000506807
463
No protein
-
P4HA2-216
ENST00000467587
456
No protein
-
P4HA2-209
ENST00000417528
1023
204aa
ENSP00000389523
P4HA2-213
ENST00000431054
724
236aa
ENSP00000391257
P4HA2-214
ENST00000439698
866
184aa
ENSP00000405406
P4HA2-206
ENST00000395164
568
167aa
ENSP00000378593
P4HA2-215
ENST00000453286
819
153aa
ENSP00000413542
P4HA2-210
ENST00000418055
568
114aa
ENSP00000403883
P4HA2-219
ENST00000478055
929
No protein
-
P4HA2-208
ENST00000416053
582
101aa
ENSP00000394953
P4HA2-212
ENST00000428841
427
50aa
ENSP00000395956
P4HA2-217
ENST00000471826
2508
No protein
-
P4HA2-220
ENST00000481636
496
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
8566 Blood Pressure 2.3369131189499E-5 17903302 8581 Blood Pressure 4.2951713158379E-5 17903302 8963 Blood Pressure 4.0782724970212E-5 17903302 8974 Blood Pressure 8.28509725157023E-5 17903302 59732 Blood Pressure 9.7798852E-006 - 60319 Blood Pressure 7.8124131E-006 - 105212 Giant Cell Arteritis 5E-9 28041642
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0004656 enables procollagen-proline 4-dioxygenase activity 2 IBA,IDA Homo_sapiens(9606) Function GO:0005506 enables iron ion binding 1 IEA Homo_sapiens(9606) Function GO:0005654 located_in nucleoplasm 1 IDA Homo_sapiens(9606) Component GO:0005783 is_active_in endoplasmic reticulum 2 IBA,IDA Homo_sapiens(9606) Component GO:0005788 located_in endoplasmic reticulum lumen 1 TAS Homo_sapiens(9606) Component GO:0005829 located_in cytosol 1 IDA Homo_sapiens(9606) Component GO:0009055 enables electron transfer activity 1 TAS Homo_sapiens(9606) Function GO:0018401 involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline 1 IBA Homo_sapiens(9606) Process GO:0022900 involved_in electron transport chain 1 IEA Homo_sapiens(9606) Process GO:0031418 enables L-ascorbic acid binding 1 IEA Homo_sapiens(9606) Function GO:0043231 located_in intracellular membrane-bounded organelle 1 IDA Homo_sapiens(9606) Component
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