Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000065911 Gene ID 10797 Accession 7434
Symbol MTHFD2 Alias NMDMC Full Name methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
Status Confidence Length 31394 bases Strand Plus strand
Position 2 : 74186172 - 74217565 RNA binding domain N.A.
Summary This gene encodes a nuclear-encoded mitochondrial bifunctional enzyme with methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase activities. The enzyme functions as a homodimer and is unique in its absolute requirement for magnesium and inorganic phosphate. Formation of the enzyme-magnesium complex allows binding of NAD. Alternative splicing results in two different transcripts, one protein-coding and the other not protein-coding. This gene has a pseudogene on chromosome 7. [provided by RefSeq, Mar 2009]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
30275950 Protein interaction and functional data indicate MTHFD2 involvement in RNA processing and translation. Costas Koufaris 2018-01-01 Cancer & metabolism
32439610 Reprogramming of serine, glycine and one-carbon metabolism in cancer. M Albert Li 2020-10-01 Biochimica et biophysica acta. Molecular basis of disease
32411609 More Than a Metabolic Enzyme: MTHFD2 as a Novel Target for Anticancer Therapy? Zhiyuan Zhu 2020-01-01 Frontiers in oncology
35054987 The Epithelial-Mesenchymal Transition at the Crossroads between Metabolism and Tumor Progression. Monica Fedele 2022-01-12 International journal of molecular sciences

Transcripts

Name Transcript ID bp Protein Translation ID
MTHFD2-213 ENST00000677997 3340 324aa ENSP00000503074
MTHFD2-209 ENST00000677170 3362 248aa ENSP00000503486
MTHFD2-218 ENST00000678684 2710 248aa ENSP00000504687
MTHFD2-203 ENST00000409804 1757 222aa ENSP00000386536
MTHFD2-205 ENST00000470592 1396 37aa ENSP00000419067
MTHFD2-208 ENST00000489041 2463 38aa ENSP00000419550
MTHFD2-220 ENST00000678955 6506 No protein -
MTHFD2-206 ENST00000477455 696 No protein -
MTHFD2-215 ENST00000678340 2057 212aa ENSP00000503933
MTHFD2-221 ENST00000679055 2276 248aa ENSP00000503701
MTHFD2-211 ENST00000677377 4033 36aa ENSP00000502903
MTHFD2-201 ENST00000394053 4403 350aa ENSP00000377617
MTHFD2-202 ENST00000409601 1865 267aa ENSP00000386542
MTHFD2-214 ENST00000678228 2320 38aa ENSP00000503299
MTHFD2-207 ENST00000488086 483 No protein -
MTHFD2-204 ENST00000462026 895 203aa ENSP00000503386
MTHFD2-216 ENST00000678623 1834 248aa ENSP00000504392
MTHFD2-219 ENST00000678731 2309 248aa ENSP00000503927
MTHFD2-210 ENST00000677299 2438 No protein -
MTHFD2-212 ENST00000677558 1243 36aa ENSP00000503573
MTHFD2-217 ENST00000678633 1239 36aa ENSP00000504822

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000287enables magnesium ion binding2IDA,IMPHomo_sapiens(9606)Function
GO:0004477enables methenyltetrahydrofolate cyclohydrolase activity4IBA,IDA,ISS,TASHomo_sapiens(9606)Function
GO:0004487enables methylenetetrahydrofolate dehydrogenase (NAD+) activity4IBA,IDA,IMP,TASHomo_sapiens(9606)Function
GO:0004488enables methylenetetrahydrofolate dehydrogenase (NADP+) activity3IBA,IDA,IMPHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005615located_in extracellular space1HDAHomo_sapiens(9606)Component
GO:0005739is_active_in mitochondrion3IBA,IDA,ISSHomo_sapiens(9606)Component
GO:0005759located_in mitochondrial matrix1TASHomo_sapiens(9606)Component
GO:0035999involved_in tetrahydrofolate interconversion1IBAHomo_sapiens(9606)Process
GO:0042301enables phosphate ion binding2IDA,IMPHomo_sapiens(9606)Function
GO:0046653involved_in tetrahydrofolate metabolic process1IDAHomo_sapiens(9606)Process
GO:0046655involved_in folic acid metabolic process1TASHomo_sapiens(9606)Process

Expression