RBP Type |
Non-canonical_RBPs |
Diseases |
Disease |
Drug |
N.A. |
Main interacting RNAs |
N.A. |
Moonlighting functions |
Metabolic enzyme |
Localizations |
N.A. |
BulkPerturb-seq
|
|
Ensembl ID | ENSG00000058804 | Gene ID |
55706 |
Accession |
25525 |
Symbol |
NDC1 |
Alias |
|
Full Name |
|
Status |
Confidence |
Length |
72819 bases |
Strand |
Minus strand |
Position |
1 : 53765478 - 53838296 |
RNA binding domain |
N.A. |
Summary |
|
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
NDC1-201 |
ENST00000371429 |
4552 |
674aa |
ENSP00000360483 |
NDC1-202 |
ENST00000480952 |
785 |
No protein |
- |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
100573 | Antidepressive Agents | 2E-6 | 27622933 |
100574 | Depressive Disorder | 2E-6 | 27622933 |
100575 | Mood Disorders | 2E-6 | 27622933 |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
GO:0005635 | located_in nuclear envelope | 2 | IDA,TAS | Homo_sapiens(9606) | Component |
GO:0005643 | part_of nuclear pore | 2 | IDA,NAS | Homo_sapiens(9606) | Component |
GO:0005737 | located_in cytoplasm | 1 | IEA | Homo_sapiens(9606) | Component |
GO:0005886 | located_in plasma membrane | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0006913 | involved_in nucleocytoplasmic transport | 1 | NAS | Homo_sapiens(9606) | Process |
GO:0006999 | involved_in nuclear pore organization | 1 | IBA | Homo_sapiens(9606) | Process |
GO:0007129 | involved_in homologous chromosome pairing at meiosis | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0007283 | involved_in spermatogenesis | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0015031 | involved_in protein transport | 1 | NAS | Homo_sapiens(9606) | Process |
GO:0015629 | located_in actin cytoskeleton | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0016020 | located_in membrane | 1 | HDA | Homo_sapiens(9606) | Component |
GO:0017056 | enables structural constituent of nuclear pore | 1 | IMP | Homo_sapiens(9606) | Function |
GO:0030674 | enables protein-macromolecule adaptor activity | 1 | IBA | Homo_sapiens(9606) | Function |
GO:0031965 | located_in nuclear membrane | 1 | IDA | Homo_sapiens(9606) | Component |
GO:0051028 | involved_in mRNA transport | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0051292 | involved_in nuclear pore complex assembly | 1 | IMP | Homo_sapiens(9606) | Process |
GO:0051664 | involved_in nuclear pore localization | 1 | IMP | Homo_sapiens(9606) | Process |
GO:0070762 | part_of nuclear pore transmembrane ring | 1 | IBA | Homo_sapiens(9606) | Component |