RBP Type
Non-canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
Stress granucle
BulkPerturb-seq
Ensembl ID ENSG00000025800 Gene ID
23633
Accession
6399
Symbol
KPNA6
Alias
IPOA7
Full Name
karyopherin subunit alpha 6
Status
Confidence
Length
68508 bases
Strand
Plus strand
Position
1 : 32108056 - 32176563
RNA binding domain
N.A.
Summary
Nucleocytoplasmic transport, a signal- and energy-dependent process, takes place through nuclear pore complexes embedded in the nuclear envelope. The import of proteins containing a nuclear localization signal (NLS) requires the NLS import receptor, a heterodimer of importin alpha and beta subunits also known as karyopherins. Importin alpha binds the NLS-containing cargo in the cytoplasm and importin beta docks the complex at the cytoplasmic side of the nuclear pore complex. In the presence of nucleoside triphosphates and the small GTP binding protein Ran, the complex moves into the nuclear pore complex and the importin subunits dissociate. Importin alpha enters the nucleoplasm with its passenger protein and importin beta remains at the pore. The protein encoded by this gene is a member of the importin alpha family. [provided by RefSeq, Jul 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
KPNA6-201
ENST00000373625
7355
536aa
ENSP00000362728
KPNA6-204
ENST00000471599
3941
186aa
ENSP00000474234
KPNA6-203
ENST00000469790
879
No protein
-
KPNA6-202
ENST00000446515
965
321aa
ENSP00000415677
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005634 is_active_in nucleus 1 IBA Homo_sapiens(9606) Component GO:0005654 is_active_in nucleoplasm 3 IBA,NAS,TAS Homo_sapiens(9606) Component GO:0005829 located_in cytosol 2 NAS,TAS Homo_sapiens(9606) Component GO:0006366 involved_in transcription by RNA polymerase II 1 IEA Homo_sapiens(9606) Process GO:0006606 involved_in protein import into nucleus 1 ISS Homo_sapiens(9606) Process GO:0006607 involved_in NLS-bearing protein import into nucleus 1 IBA Homo_sapiens(9606) Process GO:0008139 enables nuclear localization sequence binding 1 IBA Homo_sapiens(9606) Function GO:0016020 located_in membrane 1 HDA Homo_sapiens(9606) Component GO:0019079 involved_in viral genome replication 1 IEA Homo_sapiens(9606) Process GO:0042564 part_of NLS-dependent protein nuclear import complex 1 IPI Homo_sapiens(9606) Component GO:0043657 located_in host cell 1 IEA Homo_sapiens(9606) Component GO:0045944 involved_in positive regulation of transcription by RNA polymerase II 1 IEA Homo_sapiens(9606) Process GO:0060135 involved_in maternal process involved in female pregnancy 1 IEA Homo_sapiens(9606) Process GO:0061608 enables nuclear import signal receptor activity 1 IBA Homo_sapiens(9606) Function GO:0075506 acts_upstream_of_or_within entry of viral genome into host nucleus through nuclear pore complex via importin 1 IMP Homo_sapiens(9606) Process GO:1900017 involved_in positive regulation of cytokine production involved in inflammatory response 1 IEA Homo_sapiens(9606) Process GO:1903902 acts_upstream_of_or_within positive regulation of viral life cycle 1 IMP Homo_sapiens(9606) Process
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