RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
Nucleoli
BulkPerturb-seq
Ensembl ID ENSG00000023608 Gene ID
6617
Accession
11134
Symbol
SNAPC1
Alias
SNAP43;PTFgamma
Full Name
small nuclear RNA activating complex polypeptide 1
Status
Confidence
Length
34009 bases
Strand
Plus strand
Position
14 : 61762420 - 61796428
RNA binding domain
SNAPC1
Summary
Predicted to enable sequence-specific DNA binding activity. Predicted to be involved in snRNA transcription by RNA polymerase II and snRNA transcription by RNA polymerase III. Located in nucleolus and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000216294
SNAPC1
PF09808
1e-68
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
SNAPC1-201
ENST00000216294
2593
368aa
ENSP00000216294
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000995 enables RNA polymerase III general transcription initiation factor activity 1 TAS Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005654 located_in nucleoplasm 2 IDA,TAS Homo_sapiens(9606) Component GO:0005730 located_in nucleolus 1 IDA Homo_sapiens(9606) Component GO:0016251 enables RNA polymerase II general transcription initiation factor activity 1 TAS Homo_sapiens(9606) Function GO:0019185 part_of snRNA-activating protein complex 1 IBA Homo_sapiens(9606) Component GO:0042795 involved_in snRNA transcription by RNA polymerase II 1 IBA Homo_sapiens(9606) Process GO:0042796 involved_in snRNA transcription by RNA polymerase III 1 IBA Homo_sapiens(9606) Process GO:0043565 enables sequence-specific DNA binding 1 IBA Homo_sapiens(9606) Function
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