Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases Cancer
Drug N.A.
Main interacting RNAs ncRNA
Moonlighting functions E3 ligaseTransmemebrane
Localizations Stress granucle
BulkPerturb-seq DataSet_01_138

Description

Ensembl ID ENSG00000012048 Gene ID 672 Accession 1100
Symbol BRCA1 Alias IRIS;PSCP;BRCAI;BRCC1;FANCS;PNCA4;RNF53;BROVCA1;PPP1R53 Full Name BRCA1 DNA repair associated
Status Confidence Length 125951 bases Strand Minus strand
Position 17 : 43044295 - 43170245 RNA binding domain N.A.
Summary This gene encodes a 190 kD nuclear phosphoprotein that plays a role in maintaining genomic stability, and it also acts as a tumor suppressor. The BRCA1 gene contains 22 exons spanning about 110 kb of DNA. The encoded protein combines with other tumor suppressors, DNA damage sensors, and signal transducers to form a large multi-subunit protein complex known as the BRCA1-associated genome surveillance complex (BASC). This gene product associates with RNA polymerase II, and through the C-terminal domain, also interacts with histone deacetylase complexes. This protein thus plays a role in transcription, DNA repair of double-stranded breaks, and recombination. Mutations in this gene are responsible for approximately 40% of inherited breast cancers and more than 80% of inherited breast and ovarian cancers. Alternative splicing plays a role in modulating the subcellular localization and physiological function of this gene. Many alternatively spliced transcript variants, some of which are disease-associated mutations, have been described for this gene, but the full-length natures of only some of these variants has been described. A related pseudogene, which is also located on chromosome 17, has been identified. [provided by RefSeq, May 2020]

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

GWAS

Protein-Protein Interaction (PPI)

Orthologs

Gene Ontology

Expression