Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug Drug
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000011485 Gene ID 5536 Accession 9322
Symbol PPP5C Alias PP5;PPT;PPP5 Full Name protein phosphatase 5 catalytic subunit
Status Confidence Length 45895 bases Strand Plus strand
Position 19 : 46347087 - 46392981 RNA binding domain N.A.
Summary This gene encodes a serine/threonine phosphatase which is a member of the protein phosphatase catalytic subunit family. Proteins in this family participate in pathways regulated by reversible phosphorylation at serine and threonine residues; many of these pathways are involved in the regulation of cell growth and differentiation. The product of this gene has been shown to participate in signaling pathways in response to hormones or cellular stress, and elevated levels of this protein may be associated with breast cancer development. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2011]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
PPP5C-201 ENST00000012443 2139 499aa ENSP00000012443
PPP5C-205 ENST00000478046 1886 485aa ENSP00000434329
PPP5C-202 ENST00000391919 1929 371aa ENSP00000375786
PPP5C-204 ENST00000467902 399 No protein -
PPP5C-212 ENST00000527193 548 No protein -
PPP5C-207 ENST00000487483 4675 No protein -
PPP5C-214 ENST00000532058 1970 No protein -
PPP5C-206 ENST00000486994 2209 No protein -
PPP5C-203 ENST00000467502 1235 No protein -
PPP5C-210 ENST00000493347 431 No protein -
PPP5C-215 ENST00000595055 556 No protein -
PPP5C-208 ENST00000491003 878 No protein -
PPP5C-209 ENST00000492109 848 No protein -
PPP5C-211 ENST00000525507 1300 No protein -
PPP5C-213 ENST00000527623 1215 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
61721Crohn Disease9E-1226192919
62824Inflammatory Bowel Diseases2E-826192919
64520Crohn Disease4E-728067908
96826Crohn Disease2E-1023128233

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000165involved_in MAPK cascade1TASHomo_sapiens(9606)Process
GO:0000278involved_in mitotic cell cycle1TASHomo_sapiens(9606)Process
GO:0003723enables RNA binding1IEAHomo_sapiens(9606)Function
GO:0004721enables phosphoprotein phosphatase activity2ISS,TASHomo_sapiens(9606)Function
GO:0004722enables protein serine/threonine phosphatase activity4IBA,IDA,ISS,TASHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005524enables ATP binding1IDAHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1TASHomo_sapiens(9606)Component
GO:0005829is_active_in cytosol3IBA,IDA,TASHomo_sapiens(9606)Component
GO:0005886located_in plasma membrane1IEAHomo_sapiens(9606)Component
GO:0006302involved_in double-strand break repair1TASHomo_sapiens(9606)Process
GO:0006351involved_in DNA-templated transcription1TASHomo_sapiens(9606)Process
GO:0006470involved_in protein dephosphorylation1TASHomo_sapiens(9606)Process
GO:0008289enables lipid binding1IEAHomo_sapiens(9606)Function
GO:0010288involved_in response to lead ion1ISSHomo_sapiens(9606)Process
GO:0016791enables phosphatase activity1IDAHomo_sapiens(9606)Function
GO:0017018enables myosin phosphatase activity1IEAHomo_sapiens(9606)Function
GO:0032991part_of protein-containing complex1IDAHomo_sapiens(9606)Component
GO:0035970involved_in peptidyl-threonine dephosphorylation1TASHomo_sapiens(9606)Process
GO:0042802enables identical protein binding1IPIHomo_sapiens(9606)Function
GO:0043123involved_in positive regulation of I-kappaB kinase/NF-kappaB signaling1HMPHomo_sapiens(9606)Process
GO:0043231located_in intracellular membrane-bounded organelle1IDAHomo_sapiens(9606)Component
GO:0043278involved_in response to morphine1IEAHomo_sapiens(9606)Process
GO:0043531enables ADP binding1IDAHomo_sapiens(9606)Function
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function
GO:0048156enables tau protein binding1NASHomo_sapiens(9606)Function
GO:0051879enables Hsp90 protein binding1IPIHomo_sapiens(9606)Function
GO:0060090enables molecular adaptor activity1EXPHomo_sapiens(9606)Function
GO:0070262involved_in peptidyl-serine dephosphorylation2IDA,TASHomo_sapiens(9606)Process
GO:0101031part_of protein folding chaperone complex1IDAHomo_sapiens(9606)Component
GO:1904550involved_in response to arachidonic acid1ISSHomo_sapiens(9606)Process

Expression