RBP Type
Non-canonical_RBPs
Diseases
SARS-COV-2
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Metabolic enzyme
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000004864 Gene ID
10165
Accession
10983
Symbol
SLC25A13
Alias
CTLN2;NICCD;CITRIN;ARALAR2
Full Name
solute carrier family 25 member 13
Status
Confidence
Length
201928 bases
Strand
Minus strand
Position
7 : 96120220 - 96322147
RNA binding domain
N.A.
Summary
This gene is a member of the mitochondrial carrier family. The encoded protein contains four EF-hand Ca(2+) binding motifs in the N-terminal domain, and localizes to mitochondria. The protein catalyzes the exchange of aspartate for glutamate and a proton across the inner mitochondrial membrane, and is stimulated by calcium on the external side of the inner mitochondrial membrane. Mutations in this gene result in citrullinemia, type II. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2009]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
SLC25A13-201
ENST00000265631
3141
675aa
ENSP00000265631
SLC25A13-208
ENST00000494085
766
No protein
-
SLC25A13-206
ENST00000490072
578
No protein
-
SLC25A13-204
ENST00000484495
540
No protein
-
SLC25A13-207
ENST00000492869
433
No protein
-
SLC25A13-203
ENST00000472162
568
73aa
ENSP00000473505
SLC25A13-205
ENST00000487710
201
No protein
-
SLC25A13-202
ENST00000416240
3192
676aa
ENSP00000400101
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000514 enables 3-sulfino-L-alanine: proton, glutamate antiporter activity 1 IDA Homo_sapiens(9606) Function GO:0000515 enables aspartate:glutamate, proton antiporter activity 1 IDA Homo_sapiens(9606) Function GO:0005313 enables L-glutamate transmembrane transporter activity 1 IBA Homo_sapiens(9606) Function GO:0005509 enables calcium ion binding 1 IDA Homo_sapiens(9606) Function GO:0005739 located_in mitochondrion 1 IDA Homo_sapiens(9606) Component GO:0005743 located_in mitochondrial inner membrane 3 IDA,ISS,TAS Homo_sapiens(9606) Component GO:0005886 located_in plasma membrane 1 NAS Homo_sapiens(9606) Component GO:0006094 involved_in gluconeogenesis 1 TAS Homo_sapiens(9606) Process GO:0006754 involved_in ATP biosynthetic process 1 IDA Homo_sapiens(9606) Process GO:0006839 involved_in mitochondrial transport 1 NAS Homo_sapiens(9606) Process GO:0009066 involved_in aspartate family amino acid metabolic process 1 TAS Homo_sapiens(9606) Process GO:0015172 enables acidic amino acid transmembrane transporter activity 1 EXP Homo_sapiens(9606) Function GO:0015183 enables L-aspartate transmembrane transporter activity 1 IBA Homo_sapiens(9606) Function GO:0015804 involved_in neutral amino acid transport 1 IEA Homo_sapiens(9606) Process GO:0015810 involved_in aspartate transmembrane transport 2 IBA,IDA Homo_sapiens(9606) Process GO:0015813 involved_in L-glutamate transmembrane transport 2 IBA,IDA Homo_sapiens(9606) Process GO:0042802 enables identical protein binding 1 IDA Homo_sapiens(9606) Function GO:0043490 involved_in malate-aspartate shuttle 2 IBA,IDA Homo_sapiens(9606) Process GO:0045333 involved_in cellular respiration 1 IDA Homo_sapiens(9606) Process GO:0051592 involved_in response to calcium ion 1 IDA Homo_sapiens(9606) Process GO:0070778 involved_in L-aspartate transmembrane transport 1 IEA Homo_sapiens(9606) Process GO:0072337 involved_in modified amino acid transport 1 IEA Homo_sapiens(9606) Process GO:1902600 involved_in proton transmembrane transport 1 IEA Homo_sapiens(9606) Process
Copyright © 2023, Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.