Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases SARS-COV-2
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000004864 Gene ID 10165 Accession 10983
Symbol SLC25A13 Alias CTLN2;NICCD;CITRIN;ARALAR2 Full Name solute carrier family 25 member 13
Status Confidence Length 201928 bases Strand Minus strand
Position 7 : 96120220 - 96322147 RNA binding domain N.A.
Summary This gene is a member of the mitochondrial carrier family. The encoded protein contains four EF-hand Ca(2+) binding motifs in the N-terminal domain, and localizes to mitochondria. The protein catalyzes the exchange of aspartate for glutamate and a proton across the inner mitochondrial membrane, and is stimulated by calcium on the external side of the inner mitochondrial membrane. Mutations in this gene result in citrullinemia, type II. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2009]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SLC25A13-201 ENST00000265631 3141 675aa ENSP00000265631
SLC25A13-208 ENST00000494085 766 No protein -
SLC25A13-206 ENST00000490072 578 No protein -
SLC25A13-204 ENST00000484495 540 No protein -
SLC25A13-207 ENST00000492869 433 No protein -
SLC25A13-203 ENST00000472162 568 73aa ENSP00000473505
SLC25A13-205 ENST00000487710 201 No protein -
SLC25A13-202 ENST00000416240 3192 676aa ENSP00000400101

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000514enables 3-sulfino-L-alanine: proton, glutamate antiporter activity1IDAHomo_sapiens(9606)Function
GO:0000515enables aspartate:glutamate, proton antiporter activity1IDAHomo_sapiens(9606)Function
GO:0005313enables L-glutamate transmembrane transporter activity1IBAHomo_sapiens(9606)Function
GO:0005509enables calcium ion binding1IDAHomo_sapiens(9606)Function
GO:0005739located_in mitochondrion1IDAHomo_sapiens(9606)Component
GO:0005743located_in mitochondrial inner membrane3IDA,ISS,TASHomo_sapiens(9606)Component
GO:0005886located_in plasma membrane1NASHomo_sapiens(9606)Component
GO:0006094involved_in gluconeogenesis1TASHomo_sapiens(9606)Process
GO:0006754involved_in ATP biosynthetic process1IDAHomo_sapiens(9606)Process
GO:0006839involved_in mitochondrial transport1NASHomo_sapiens(9606)Process
GO:0009066involved_in aspartate family amino acid metabolic process1TASHomo_sapiens(9606)Process
GO:0015172enables acidic amino acid transmembrane transporter activity1EXPHomo_sapiens(9606)Function
GO:0015183enables L-aspartate transmembrane transporter activity1IBAHomo_sapiens(9606)Function
GO:0015804involved_in neutral amino acid transport1IEAHomo_sapiens(9606)Process
GO:0015810involved_in aspartate transmembrane transport2IBA,IDAHomo_sapiens(9606)Process
GO:0015813involved_in L-glutamate transmembrane transport2IBA,IDAHomo_sapiens(9606)Process
GO:0042802enables identical protein binding1IDAHomo_sapiens(9606)Function
GO:0043490involved_in malate-aspartate shuttle2IBA,IDAHomo_sapiens(9606)Process
GO:0045333involved_in cellular respiration1IDAHomo_sapiens(9606)Process
GO:0051592involved_in response to calcium ion1IDAHomo_sapiens(9606)Process
GO:0070778involved_in L-aspartate transmembrane transport1IEAHomo_sapiens(9606)Process
GO:0072337involved_in modified amino acid transport1IEAHomo_sapiens(9606)Process
GO:1902600involved_in proton transmembrane transport1IEAHomo_sapiens(9606)Process

Expression