Description

Ensembl ID ENSFTIG00000000588 Gene ID Accession -
Symbol Alias - Full Name ataxin 2
Status Confidence Length 43899 bases Strand Minus strand
Position ML996755.1 : 279883 - 323781 RNA binding domain LsmAD , PAM2 , SM-ATX
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSFTIP00000001483 LsmAD PF06741 4.7e-15 1
ENSFTIP00000001483 PAM2 PF07145 1.1e-06 2
ENSFTIP00000001483 SM-ATX PF14438 1.2e-20 3
ENSFTIP00000001467 LsmAD PF06741 5.3e-15 1
ENSFTIP00000001467 PAM2 PF07145 1.1e-06 2
ENSFTIP00000001467 SM-ATX PF14438 1.3e-20 3
ENSFTIP00000001513 LsmAD PF06741 5.5e-15 1
ENSFTIP00000001513 PAM2 PF07145 1.2e-06 2
ENSFTIP00000001513 SM-ATX PF14438 3.5e-20 3
ENSFTIP00000001280 LsmAD PF06741 5.7e-15 1
ENSFTIP00000001280 PAM2 PF07145 1.2e-06 2
ENSFTIP00000001280 SM-ATX PF14438 1.4e-20 3
ENSFTIP00000001444 LsmAD PF06741 5.7e-15 1
ENSFTIP00000001444 PAM2 PF07145 1.2e-06 2
ENSFTIP00000001444 SM-ATX PF14438 1.4e-20 3
ENSFTIP00000001736 LsmAD PF06741 6e-15 1
ENSFTIP00000001736 PAM2 PF07145 1.3e-06 2
ENSFTIP00000001736 SM-ATX PF14438 1.5e-20 3
ENSFTIP00000001457 LsmAD PF06741 6e-15 1
ENSFTIP00000001457 PAM2 PF07145 1.3e-06 2
ENSFTIP00000001457 SM-ATX PF14438 1.5e-20 3
ENSFTIP00000001757 LsmAD PF06741 6.1e-15 1
ENSFTIP00000001757 PAM2 PF07145 1.3e-06 2
ENSFTIP00000001757 SM-ATX PF14438 1.5e-20 3
ENSFTIP00000001718 PAM2 PF07145 6.4e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSFTIT00000001346 3216 1071aa ENSFTIP00000001280
- ENSFTIT00000001520 3240 1079aa ENSFTIP00000001444
- ENSFTIT00000001533 3321 1106aa ENSFTIP00000001457
- ENSFTIT00000001543 2991 996aa ENSFTIP00000001467
- ENSFTIT00000001561 2919 972aa ENSFTIP00000001483
- ENSFTIT00000001589 3180 1050aa ENSFTIP00000001513
- ENSFTIT00000001804 3114 571aa ENSFTIP00000001718
- ENSFTIT00000001822 3306 1101aa ENSFTIP00000001736
- ENSFTIT00000001844 3351 1116aa ENSFTIP00000001757

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSFTIG00000000588

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSFTIG00000000588

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression