RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSFDAG00000011272	Gene ID	104855676	Accession	-
Symbol		Alias	-	Full Name	symplekin
Status	Confidence	Length	28514 bases	Strand	Plus strand
Position	KN125239.1 : 175257 - 203770	RNA binding domain	Symplekin_C , SYMPK_PTA1_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSFDAP00000001237	Symplekin_C	PF12295	1.3e-73	1
ENSFDAP00000001237	SYMPK_PTA1_N	PF11935	5.5e-54	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSFDAT00000015235	4166	1269aa	ENSFDAP00000001237

Gene Model

Click here to download ENSFDAG00000011272's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSFDAG00000011272's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSFDAG00000011272

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSFDAG00000011272

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression