RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSFCAG00000053653	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	81447 bases	Strand	Minus strand
Position	E2 : 30059995 - 30141441	RNA binding domain	HGTP_anticodon
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSFCAP00000053990	HGTP_anticodon	PF03129	2e-05	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSFCAT00000076503	1518	407aa	ENSFCAP00000053990

Gene Model

Click here to download ENSFCAG00000053653's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSFCAG00000053653's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSFCAG00000053653	felis_catus	ENSFCAP00000031024	29.0441	16.7279	felis_catus	ENSFCAP00000053990	38.8206	22.3587

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	64.1278	50.3685	ornithorhynchus_anatinus	ENSOANP00000000925	63.8142	50.1222
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	67.0762	53.0713	sarcophilus_harrisii	ENSSHAP00000036551	44.7541	35.4098
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	65.8477	56.2654	dasypus_novemcinctus	ENSDNOP00000023936	77.0115	65.8046
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	88.4521	82.5553	vulpes_vulpes	ENSVVUP00000024688	88.67	82.7586
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	88.2064	82.3096	canis_lupus_familiaris	ENSCAFP00845006170	88.4236	82.5123
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	88.2064	82.0639	ailuropoda_melanoleuca	ENSAMEP00000028027	71.2302	66.2698
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	77.6413	71.4988	mustela_putorius_furo	ENSMPUP00000003050	74.8815	68.9573
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	57.0025	45.9459	monodelphis_domestica	ENSMODP00000039891	68.2353	55
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	63.145	50.6143	vombatus_ursinus	ENSVURP00010026404	67.6316	54.2105
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	67.0762	53.5627	phascolarctos_cinereus	ENSPCIP00000003632	63.4884	50.6977
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	88.2064	82.0639	ursus_maritimus	ENSUMAP00000008729	79.0749	73.5683
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	26.0442	14.0049	drosophila_melanogaster	FBpp0076546	28.5714	15.3639
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	35.8722	22.113	petromyzon_marinus	ENSPMAP00000004627	24.7039	15.2284
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	40.2948	22.6044	eptatretus_burgeri	ENSEBUP00000020270	14.4621	8.11287
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	44.7174	26.5356	callorhinchus_milii	ENSCMIP00000040606	51.5581	30.5949
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	55.774	38.5749	latimeria_chalumnae	ENSLACP00000013179	47.9915	33.1924
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	56.5111	41.5233	lepisosteus_oculatus	ENSLOCP00000009046	50.9978	37.4723
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.1744	32.1867	clupea_harengus	ENSCHAP00000012228	35.6877	24.3494
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	45.4545	32.6781	danio_rerio	ENSDARP00000120005	39.0295	28.0591
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.1744	33.4152	carassius_auratus	ENSCARP00000125503	39.5876	28.0412
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.1916	32.9238	carassius_auratus	ENSCARP00000024310	38.7629	27.6289
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	44.9631	31.6953	astyanax_mexicanus	ENSAMXP00000031065	35.534	25.0485
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	45.2088	31.4496	ictalurus_punctatus	ENSIPUP00000029927	35.7282	24.8544
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	33.9066	25.0614	electrophorus_electricus	ENSEEEP00000047550	37.8082	27.9452
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	48.6486	35.6265	oncorhynchus_kisutch	ENSOKIP00005000881	46.5882	34.1176
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.9115	33.9066	esox_lucius	ENSELUP00000015021	44.1176	31.2217
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	34.6437	26.2899	oncorhynchus_mykiss	ENSOMYP00000025995	47.9592	36.3946
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	48.1572	35.1351	salmo_salar	ENSSSAP00000174429	45.7944	33.4112
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	48.6486	35.3808	salmo_trutta	ENSSTUP00000055713	45.9397	33.4107
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	30.9582	22.6044	salmo_trutta	ENSSTUP00000036945	42	30.6667
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.683	33.9066	gadus_morhua	ENSGMOP00000013788	44.4965	32.3185
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.1916	33.1695	fundulus_heteroclitus	ENSFHEP00000018728	43.5185	31.25
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.1916	33.9066	xiphophorus_maculatus	ENSXMAP00000040454	43.8228	32.1678
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.1744	31.941	oryzias_latipes	ENSORLP00000038522	45.933	31.1005
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.1744	33.4152	cyclopterus_lumpus	ENSCLMP00005018121	45.0704	31.9249
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.683	32.6781	oreochromis_niloticus	ENSONIP00000009284	44.8113	31.3679
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.4373	32.4324	haplochromis_burtoni	ENSHBUP00000000501	44.5755	31.1321
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.683	32.6781	astatotilapia_calliptera	ENSACLP00000021277	44.8113	31.3679
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	43.7346	31.2039	lates_calcarifer	ENSLCAP00010023627	48.3696	34.5109
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.1916	32.4324	sparus_aurata	ENSSAUP00010024453	43.418	30.485
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	58.4767	43.7346	xenopus_tropicalis	ENSXETP00000116077	48.0808	35.9596
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	67.8133	53.317	chrysemys_picta_bellii	ENSCPBP00000022336	55.6452	43.75
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	68.059	53.5627	sphenodon_punctatus	ENSSPUP00000013388	63.0979	49.6583
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	63.3907	48.1572	laticauda_laticaudata	ENSLLTP00000017230	62.1687	47.2289
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	62.6536	47.6658	notechis_scutatus	ENSNSUP00000014386	62.8079	47.7833
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	63.145	47.6658	pseudonaja_textilis	ENSPTXP00000012949	61.4833	46.4115
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	61.6708	44.7174	anolis_carolinensis	ENSACAP00000029187	50	36.255
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.1744	32.4324	oryzias_melastigma	ENSOMEP00000014795	45.4976	31.2796
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.4201	33.6609	stegastes_partitus	ENSSPAP00000025014	45.4118	32.2353
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.4201	32.9238	dicentrarchus_labrax	ENSDLAP00005042941	44.7796	31.0905
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.683	33.1695	cyprinodon_variegatus	ENSCVAP00000030351	44.7059	31.7647
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	42.7518	33.4152	podarcis_muralis	ENSPMRP00000029749	63.0435	49.2754
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	41.2776	28.5012	amphilophus_citrinellus	ENSACIP00000020743	50.7553	35.0453
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.4201	33.6609	seriola_lalandi_dorsalis	ENSSLDP00000019060	45.4118	32.2353
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	40.2948	27.5184	anabas_testudineus	ENSATEP00000018790	36.9369	25.2252
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	62.1622	45.7002	leptobrachium_leishanense	ENSLLEP00000027143	52.381	38.5093
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	25.5528	19.1646	tetraodon_nigroviridis	ENSTNIP00000005338	44.0678	33.0508
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	42.7518	30.7125	amphiprion_ocellaris	ENSAOCP00000029535	46.9003	33.6927
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.683	32.9238	acanthochromis_polyacanthus	ENSAPOP00000003579	42.8894	30.2483
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	39.5577	27.2727	neolamprologus_brichardi	ENSNBRP00000025462	46.2644	31.8966
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	67.0762	52.0885	pelodiscus_sinensis	ENSPSIP00000012272	56.2887	43.7113
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	67.8133	53.317	terrapene_carolina_triunguis	ENSTMTP00000031387	55.6452	43.75
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	45.9459	31.941	betta_splendens	ENSBSLP00000001334	44.7368	31.1005
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	39.0663	27.5184	pundamilia_nyererei	ENSPNYP00000017197	41.4062	29.1667
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.4201	33.6609	seriola_dumerili	ENSSDUP00000029746	45.4118	32.2353
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.683	31.6953	mastacembelus_armatus	ENSMAMP00000024708	44.8113	30.4245
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	64.1278	48.1572	salvator_merianae	ENSSMRP00000006399	57.1116	42.8884
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	34.8894	26.7813	myripristis_murdjan	ENSMMDP00005018322	44.5141	34.1693
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	45.4545	32.4324	nothobranchius_furzeri	ENSNFUP00015047060	43.7352	31.2057
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	48.6486	35.6265	oncorhynchus_tshawytscha	ENSOTSP00005090521	46.5882	34.1176
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	44.9631	32.1867	pygocentrus_nattereri	ENSPNAP00000010226	30.0493	21.5107
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	45.7002	33.4152	kryptolebias_marmoratus	ENSKMAP00000008377	44.2857	32.381
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	32.4324	24.57	sinocyclocheilus_grahami	ENSSGRP00000052762	37.8223	28.6533
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.4373	32.6781	sinocyclocheilus_grahami	ENSSGRP00000059276	39.4572	27.7662
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.4201	33.1695	larimichthys_crocea	ENSLCRP00005062399	45.5189	31.8396
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.1744	32.1867	oryzias_javanicus	ENSOJAP00000022138	45.4976	31.0427
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.1744	33.6609	amphiprion_percula	ENSAPEP00000031624	43.3409	30.9255
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	48.403	35.6265	hucho_hucho	ENSHHUP00000079155	46.028	33.8785
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.4373	32.6781	cyprinus_carpio_carpio	ENSCCRP00000006048	38.9691	27.4227
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.4373	32.6781	cyprinus_carpio_carpio	ENSCCRP00000153787	38.9691	27.4227
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	37.3464	28.0098	poecilia_latipinna	ENSPLAP00000011010	49.3507	37.013
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	45.4545	32.4324	denticeps_clupeoides	ENSDCDP00000024788	39.6996	28.3262
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	67.5676	53.0713	chelonoidis_abingdonii	ENSCABP00000020831	55.4436	43.5484
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	44.7174	30.2211	cynoglossus_semilaevis	ENSCSEP00000033500	40.3548	27.2727
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.4201	31.941	oryzias_sinensis	ENSOSIP00000035739	46.1722	31.1005
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	34.398	23.3415	gasterosteus_aculeatus	ENSGACP00000003435	55.7769	37.8486
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	63.3907	47.9115	naja_naja	ENSNNAP00000019235	62.1687	46.988
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.683	32.6781	maylandia_zebra	ENSMZEP00005021571	44.8113	31.3679
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	67.5676	53.0713	gopherus_evgoodei	ENSGEVP00005021236	55.4436	43.5484
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.9287	34.1523	poecilia_formosa	ENSPFOP00000003318	44.5221	32.4009
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	32.9238	24.57	scophthalmus_maximus	ENSSMAP00000023112	43.0868	32.1543
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	47.1744	32.4324	scleropages_formosus	ENSSFOP00015019536	42.6667	29.3333
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	55.0369	40.2948	erpetoichthys_calabaricus	ENSECRP00000019755	56.8528	41.6244
ENSFCAG00000053653	felis_catus	ENSFCAP00000053990	46.683	33.1695	cottoperca_gobio	ENSCGOP00000005916	44.0835	31.3225

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression