RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSFCAG00000037997	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1254 bases	Strand	Minus strand
Position	B3 : 137331499 - 137332752	RNA binding domain	Ribosomal_S3Ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSFCAP00000032361	Ribosomal_S3Ae	PF01015	1.3e-21	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSFCAT00000040298	420	139aa	ENSFCAP00000032361

Gene Model

Click here to download ENSFCAG00000037997's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSFCAG00000037997's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSFCAG00000037997

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSFCAG00000037997	felis_catus	ENSFCAP00000032361	58.9928	56.1151	callithrix_jacchus	ENSCJAP00000091306	68.9076	65.5462
ENSFCAG00000037997	felis_catus	ENSFCAP00000032361	93.5252	91.3669	panthera_pardus	ENSPPRP00000001371	91.5493	89.4366
ENSFCAG00000037997	felis_catus	ENSFCAP00000032361	35.9712	30.9353	monodelphis_domestica	ENSMODP00000048825	71.4286	61.4286
ENSFCAG00000037997	felis_catus	ENSFCAP00000032361	60.4317	58.2734	balaenoptera_musculus	ENSBMSP00010023440	86.5979	83.5052
ENSFCAG00000037997	felis_catus	ENSFCAP00000032361	59.7122	56.8345	rhinolophus_ferrumequinum	ENSRFEP00010022294	83.8384	79.798
ENSFCAG00000037997	felis_catus	ENSFCAP00000032361	93.5252	91.3669	panthera_tigris_altaica	ENSPTIP00000004518	91.5493	89.4366
ENSFCAG00000037997	felis_catus	ENSFCAP00000032361	58.2734	55.3957	catagonus_wagneri	ENSCWAP00000026682	78.6408	74.7573
ENSFCAG00000037997	felis_catus	ENSFCAP00000032361	97.8417	96.4029	panthera_leo	ENSPLOP00000021952	97.8417	96.4029
ENSFCAG00000037997	felis_catus	ENSFCAP00000032361	58.2734	54.6763	peromyscus_maniculatus_bairdii	ENSPEMP00000034957	66.9421	62.8099

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression