RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSFCAG00000024233	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	14419 bases	Strand	Minus strand
Position	A3 : 63192036 - 63206454	RNA binding domain	Ribosomal_L30
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSFCAP00000055083	Ribosomal_L30	PF00327	2.2e-13	1
ENSFCAP00000061741	Ribosomal_L30	PF00327	2.6e-13	1
ENSFCAP00000051114	Ribosomal_L30	PF00327	2.8e-13	1
ENSFCAP00000016511	Ribosomal_L30	PF00327	3e-13	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSFCAT00000050578	836	245aa	ENSFCAP00000051114
-	ENSFCAT00000031208	857	252aa	ENSFCAP00000016511
-	ENSFCAT00000069358	776	225aa	ENSFCAP00000061741
-	ENSFCAT00000077191	1368	211aa	ENSFCAP00000055083

Gene Model

Click here to download ENSFCAG00000024233's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSFCAG00000024233's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSFCAG00000024233	felis_catus	ENSFCAP00000058569	63.8889	55	felis_catus	ENSFCAP00000016511	45.6349	39.2857

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.1429	52.7778	sarcophilus_harrisii	ENSSHAP00000033033	89.441	82.6087
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.5238	54.7619	choloepus_hoffmanni	ENSCHOP00000005136	92.0245	84.6626
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.7302	54.3651	dasypus_novemcinctus	ENSDNOP00000030024	91.9255	85.0932
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	55.5556	50.3968	dasypus_novemcinctus	ENSDNOP00000017852	87.5	79.375
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.5238	55.5556	dasypus_novemcinctus	ENSDNOP00000014475	93.1677	86.9565
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	56.746	51.9841	dasypus_novemcinctus	ENSDNOP00000025715	91.6667	83.9744
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	61.1111	56.3492	echinops_telfairi	ENSETEP00000004076	90.5882	83.5294
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	63.8889	59.5238	callithrix_jacchus	ENSCJAP00000013148	81.3131	75.7576
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	56.3492	cercocebus_atys	ENSCATP00000036561	94.4099	88.1988
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.9206	55.9524	macaca_fascicularis	ENSMFAP00000004020	93.7888	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	56.3492	macaca_mulatta	ENSMMUP00000070810	94.4099	88.1988
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	50	46.0317	macaca_nemestrina	ENSMNEP00000020688	94.0299	86.5672
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.9206	55.9524	papio_anubis	ENSPANP00000041815	93.7888	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.9206	55.9524	mandrillus_leucophaeus	ENSMLEP00000007442	93.7888	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.7143	56.746	gorilla_gorilla	ENSGGOP00000035658	95.0311	88.8199
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	55.9524	pan_paniscus	ENSPPAP00000032064	94.4099	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	55.9524	pongo_abelii	ENSPPYP00000042998	94.4099	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.7143	56.746	homo_sapiens	ENSP00000338057	95.0311	88.8199
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	55.9524	pan_troglodytes	ENSPTRP00000021034	94.4099	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	62.3016	60.7143	canis_lupus_familiaris	ENSCAFP00845024837	97.5155	95.0311
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	61.5079	58.3333	ursus_americanus	ENSUAMP00000019673	96.2733	91.3043
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	65.4762	62.6984	ailuropoda_melanoleuca	ENSAMEP00000026474	93.2203	89.2655
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.7143	58.3333	mustela_putorius_furo	ENSMPUP00000010995	95.625	91.875
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	63.0952	63.0952	panthera_pardus	ENSPPRP00000016692	98.7578	98.7578
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	65.0794	61.5079	equus_caballus	ENSECAP00000081887	63.8132	60.3113
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	62.3016	58.3333	loxodonta_africana	ENSLAFP00000006835	85.7924	80.3279
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.7143	57.1429	equus_asinus	ENSEASP00005031997	95.0311	89.441
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	46.0317	40.4762	mesocricetus_auratus	ENSMAUP00000015313	81.1189	71.3287
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.5397	53.9683	mesocricetus_auratus	ENSMAUP00000024491	87.3494	81.9277
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.127	54.7619	mesocricetus_auratus	ENSMAUP00000019334	86.6279	80.2326
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.127	56.746	marmota_marmota_marmota	ENSMMMP00000022580	96.129	92.2581
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	56.3492	51.9841	delphinapterus_leucas	ENSDLEP00000028305	88.1988	81.3665
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.7302	56.746	delphinapterus_leucas	ENSDLEP00000001645	91.9255	88.8199
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.3333	53.5714	mus_spretus	MGP_SPRETEiJ_P0018240	91.875	84.375
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.5238	55.5556	saimiri_boliviensis_boliviensis	ENSSBOP00000040689	93.1677	86.9565
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	31.746	28.1746	saimiri_boliviensis_boliviensis	ENSSBOP00000010595	91.954	81.6092
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	62.3016	59.5238	tursiops_truncatus	ENSTTRP00000004647	90.2299	86.2069
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.5238	56.746	capra_hircus	ENSCHIP00000028746	93.1677	88.8199
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.7302	53.9683	mus_caroli	MGP_CAROLIEiJ_P0017238	92.5	85
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	55.9524	51.5873	monodon_monoceros	ENSMMNP00015029784	87.5776	80.7453
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.7302	56.746	monodon_monoceros	ENSMMNP00015021217	91.9255	88.8199
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.5397	53.1746	mus_musculus	ENSMUSP00000027256	90.625	83.75
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.9206	55.9524	aotus_nancymaae	ENSANAP00000020956	93.7888	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.127	55.5556	bos_grunniens	ENSBGRP00000042939	92.5466	86.9565
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.127	57.5397	balaenoptera_musculus	ENSBMSP00010019039	92.5466	90.0621
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.7302	55.9524	ovis_aries_rambouillet	ENSOARP00020017767	91.9255	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.127	55.9524	ovis_aries_rambouillet	ENSOARP00020016142	92.5466	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	57.1429	oryctolagus_cuniculus	ENSOCUP00000003556	94.4099	89.441
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.3333	53.5714	mus_pahari	MGP_PahariEiJ_P0072586	91.875	84.375
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	56.3492	51.1905	vombatus_ursinus	ENSVURP00010000293	88.1988	80.1242
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	62.6984	59.127	rhinolophus_ferrumequinum	ENSRFEP00010033451	94.0476	88.6905
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.7143	55.5556	otolemur_garnettii	ENSOGAP00000002000	91.6168	83.8323
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.1429	50.3968	otolemur_garnettii	ENSOGAP00000016336	89.441	78.882
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	53.9683	49.2063	otolemur_garnettii	ENSOGAP00000019310	86.076	78.481
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	54.7619	50	phocoena_sinus	ENSPSNP00000027352	85.7143	78.2609
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.7302	56.746	phocoena_sinus	ENSPSNP00000009937	91.9255	88.8199
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.127	55.9524	bos_taurus	ENSBTAP00000005183	92.5466	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	62.6984	57.1429	pteropus_vampyrus	ENSPVAP00000006219	92.3977	84.2105
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.1429	51.5873	phascolarctos_cinereus	ENSPCIP00000047432	89.441	80.7453
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	51.1905	47.2222	carlito_syrichta	ENSTSYP00000023768	87.1622	80.4054
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	56.3492	carlito_syrichta	ENSTSYP00000031451	94.4099	88.1988
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	56.746	53.5714	cavia_porcellus	ENSCPOP00000009619	92.2581	87.0968
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.3333	54.3651	microtus_ochrogaster	ENSMOCP00000006049	91.875	85.625
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.127	56.3492	urocitellus_parryii	ENSUPAP00010006117	96.129	91.6129
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	56.746	52.7778	octodon_degus	ENSODEP00000013464	88.8199	82.6087
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.5397	53.5714	octodon_degus	ENSODEP00000008056	90.0621	83.8509
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.5238	53.9683	octodon_degus	ENSODEP00000025857	83.7989	75.9777
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.5397	50.7937	octodon_degus	ENSODEP00000025434	81.0056	71.5084
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	62.3016	58.3333	ursus_maritimus	ENSUMAP00000011925	86.2637	80.7692
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.5397	53.9683	nannospalax_galili	ENSNGAP00000021014	90.625	85
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	55.1587	51.1905	rhinopithecus_bieti	ENSRBIP00000036252	89.6774	83.2258
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	55.9524	50.7937	dipodomys_ordii	ENSDORP00000010087	87.037	79.0123
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	55.9524	chlorocebus_sabaeus	ENSCSAP00000013255	94.4099	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	63.0952	63.0952	panthera_tigris_altaica	ENSPTIP00000002003	98.7578	98.7578
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.7302	56.746	moschus_moschiferus	ENSMMSP00000002631	91.9255	88.8199
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	32.1429	30.1587	sorex_araneus	ENSSARP00000000780	59.5588	55.8824
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	48.0159	41.2698	rattus_norvegicus	ENSRNOP00000079080	76.1006	65.4088
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	63.0952	55.9524	rattus_norvegicus	ENSRNOP00000083246	85.4839	75.8064
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.7143	57.5397	sus_scrofa	ENSSSCP00000068548	95.0311	90.0621
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	55.9524	52.7778	physeter_catodon	ENSPCTP00005013614	87.5776	82.6087
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	42.4603	40.4762	tupaia_belangeri	ENSTBEP00000006665	62.5731	59.6491
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.9365	52.381	ochotona_princeps	ENSOPRP00000006713	87.4251	79.0419
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	61.1111	55.9524	chinchilla_lanigera	ENSCLAP00000008109	86.0335	78.771
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	55.9524	51.9841	cebus_imitator	ENSCCAP00000003034	88.6792	82.3899
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.3333	54.3651	cebus_imitator	ENSCCAP00000032871	91.875	85.625
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	62.6984	58.3333	bos_indicus_hybrid	ENSBIXP00005008738	65.5602	60.9958
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.127	55.9524	bison_bison_bison	ENSBBBP00000015491	92.5466	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.7302	55.5556	cricetulus_griseus_chok1gshd	ENSCGRP00001004754	92.5	87.5
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	56.3492	nomascus_leucogenys	ENSNLEP00000042462	94.4099	88.1988
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	47.2222	42.4603	nomascus_leucogenys	ENSNLEP00000025972	83.2168	74.8252
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	61.9048	60.3175	canis_lupus_dingo	ENSCAFP00020032050	96.8944	94.4099
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.5238	55.9524	prolemur_simus	ENSPSMP00000027783	93.1677	87.5776
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.7143	57.5397	catagonus_wagneri	ENSCWAP00000001290	95.0311	90.0621
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.9206	57.9365	camelus_dromedarius	ENSCDRP00005026032	93.7888	90.6832
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.127	55.5556	bos_mutus	ENSBMUP00000001904	92.5466	86.9565
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.5238	57.1429	cervus_hanglu_yarkandensis	ENSCHYP00000015171	93.1677	89.441
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.9365	53.5714	jaculus_jaculus	ENSJJAP00000003232	90.6832	83.8509
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	56.3492	rhinopithecus_roxellana	ENSRROP00000043247	94.4099	88.1988
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	82.1429	82.1429	panthera_leo	ENSPLOP00000018455	98.1043	98.1043
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	60.3175	58.3333	neovison_vison	ENSNVIP00000030201	95	91.875
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.7302	55.1587	peromyscus_maniculatus_bairdii	ENSPEMP00000020326	92.5	86.875
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	56.3492	51.5873	peromyscus_maniculatus_bairdii	ENSPEMP00000005255	88.75	81.25
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.1429	51.9841	mus_spicilegus	ENSMSIP00000012657	90	81.875
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	53.9683	46.4286	mus_spicilegus	ENSMSIP00000021222	85	73.125
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	57.9365	53.5714	mus_spicilegus	ENSMSIP00000007332	91.25	84.375
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	54.7619	49.2063	mus_spicilegus	ENSMSIP00000004254	88.4615	79.4872
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	53.1746	46.4286	microcebus_murinus	ENSMICP00000016554	87.5817	76.4706
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.9206	54.3651	microcebus_murinus	ENSMICP00000010575	93.7888	85.0932
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	49.2063	46.0317	microcebus_murinus	ENSMICP00000020467	91.8519	85.9259
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	58.7302	55.5556	sciurus_vulgaris	ENSSVLP00005014365	91.9255	86.9565
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.5238	56.3492	sciurus_vulgaris	ENSSVLP00005018675	93.1677	88.1988
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	59.5238	56.3492	propithecus_coquereli	ENSPCOP00000005238	93.1677	88.1988
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	56.746	52.381	propithecus_coquereli	ENSPCOP00000000351	88.8199	81.9876
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	42.8571	33.7302	gadus_morhua	ENSGMOP00000013450	68.3544	53.7975
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	41.2698	32.9365	sphenodon_punctatus	ENSSPUP00000000839	59.0909	47.1591
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	37.3016	26.1905	coturnix_japonica	ENSCJPP00005000103	59.1195	41.5094
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	44.4444	33.3333	hucho_hucho	ENSHHUP00000047090	63.2768	47.4576
ENSFCAG00000024233	felis_catus	ENSFCAP00000016511	45.6349	39.6825	gopherus_evgoodei	ENSGEVP00005000140	79.3103	68.9655

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression