Description

Ensembl ID ENSFCAG00000009350 Gene ID Accession -
Symbol APOBEC1 Alias - Full Name apolipoprotein B mRNA editing enzyme catalytic subunit 1
Status Confidence Length 8284 bases Strand Plus strand
Position B4 : 43178711 - 43186994 RNA binding domain APOBEC_N , APOBEC_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSFCAP00000008672 APOBEC_N PF08210 3.1e-32 1
ENSFCAP00000008672 APOBEC_C PF05240 1.3e-22 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
APOBEC1-201 ENSFCAT00000009352 1253 236aa ENSFCAP00000008672

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSFCAG00000009350felis_catusENSFCAP0000002901538.362122.8448felis_catusENSFCAP0000000867237.711922.4576
ENSFCAG00000009350felis_catusENSFCAP0000005911228.840117.2414felis_catusENSFCAP0000000867238.983123.3051
ENSFCAG00000009350felis_catusENSFCAP0000000378735.267920.9821felis_catusENSFCAP0000000867233.474619.9153

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSFCAG00000009350felis_catusENSFCAP0000000867268.220352.9661ornithorhynchus_anatinusENSOANP0000005460062.403148.4496
ENSFCAG00000009350felis_catusENSFCAP0000000867281.355969.0678sarcophilus_harrisiiENSSHAP0000001033683.478370.8696
ENSFCAG00000009350felis_catusENSFCAP0000000867281.355967.7966notamacropus_eugeniiENSMEUP0000001222681.355967.7966
ENSFCAG00000009350felis_catusENSFCAP0000000867241.525437.2881choloepus_hoffmanniENSCHOP0000000208480.327972.1311
ENSFCAG00000009350felis_catusENSFCAP0000000867286.864479.661dasypus_novemcinctusENSDNOP0000003491786.864479.661
ENSFCAG00000009350felis_catusENSFCAP0000000867274.152563.5593erinaceus_europaeusENSEEUP0000000828877.777866.6667
ENSFCAG00000009350felis_catusENSFCAP0000000867255.932248.3051erinaceus_europaeusENSEEUP0000000683762.857154.2857
ENSFCAG00000009350felis_catusENSFCAP0000000867284.745877.5424echinops_telfairiENSETEP0000000397384.745877.5424
ENSFCAG00000009350felis_catusENSFCAP0000000867287.288179.661callithrix_jacchusENSCJAP0000000986883.064575.8064
ENSFCAG00000009350felis_catusENSFCAP0000000867288.135682.6271cercocebus_atysENSCATP0000000716383.87178.629
ENSFCAG00000009350felis_catusENSFCAP0000000867288.559383.0508macaca_fascicularisENSMFAP0000004508184.274279.0323
ENSFCAG00000009350felis_catusENSFCAP0000000867288.559383.0508macaca_mulattaENSMMUP0000007709988.559383.0508
ENSFCAG00000009350felis_catusENSFCAP0000000867288.135682.6271macaca_nemestrinaENSMNEP0000001052588.135682.6271
ENSFCAG00000009350felis_catusENSFCAP0000000867287.711982.2034papio_anubisENSPANP0000000417087.711982.2034
ENSFCAG00000009350felis_catusENSFCAP0000000867288.135682.6271mandrillus_leucophaeusENSMLEP0000002428488.135682.6271
ENSFCAG00000009350felis_catusENSFCAP0000000867279.66173.7288pan_paniscusENSPPAP0000000882386.238579.8165
ENSFCAG00000009350felis_catusENSFCAP0000000867287.288179.661pongo_abeliiENSPPYP0000000482087.288179.661
ENSFCAG00000009350felis_catusENSFCAP0000000867288.559381.3559homo_sapiensENSP0000022930488.559381.3559
ENSFCAG00000009350felis_catusENSFCAP0000000867288.559381.7797pan_troglodytesENSPTRP0000000788288.559381.7797
ENSFCAG00000009350felis_catusENSFCAP0000000867291.949285.5932vulpes_vulpesENSVVUP0000001437491.949285.5932
ENSFCAG00000009350felis_catusENSFCAP0000000867290.254283.4746canis_lupus_familiarisENSCAFP0084504121786.234879.7571
ENSFCAG00000009350felis_catusENSFCAP0000000867291.949284.7458ursus_americanusENSUAMP0000001450288.934481.9672
ENSFCAG00000009350felis_catusENSFCAP0000000867293.220386.017ailuropoda_melanoleucaENSAMEP0000000748093.61786.383
ENSFCAG00000009350felis_catusENSFCAP0000000867293.644187.2881mustela_putorius_furoENSMPUP0000001742093.644187.2881
ENSFCAG00000009350felis_catusENSFCAP0000000867210099.5763panthera_pardusENSPPRP0000002134910099.5763
ENSFCAG00000009350felis_catusENSFCAP0000000867291.101785.1695equus_caballusENSECAP0000003751091.101785.1695
ENSFCAG00000009350felis_catusENSFCAP0000000867285.169575.4237loxodonta_africanaENSLAFP0000002142290.134579.8206
ENSFCAG00000009350felis_catusENSFCAP0000000867291.101785.1695equus_asinusENSEASP0000502343691.101785.1695
ENSFCAG00000009350felis_catusENSFCAP0000000867286.864478.8136vicugna_pacosENSVPAP0000000123986.864478.8136
ENSFCAG00000009350felis_catusENSFCAP0000000867273.728864.8305mesocricetus_auratusENSMAUP0000002573178.378468.9189
ENSFCAG00000009350felis_catusENSFCAP0000000867286.864479.661marmota_marmota_marmotaENSMMMP0000001580689.130481.7391
ENSFCAG00000009350felis_catusENSFCAP0000000867283.474676.2712delphinapterus_leucasENSDLEP0000002247983.829876.5957
ENSFCAG00000009350felis_catusENSFCAP0000000867280.508568.6441mus_spretusMGP_SPRETEiJ_P007907482.969470.7424
ENSFCAG00000009350felis_catusENSFCAP0000000867266.101760.1695saimiri_boliviensis_boliviensisENSSBOP0000002839388.135680.226
ENSFCAG00000009350felis_catusENSFCAP0000000867266.525460.5932tursiops_truncatusENSTTRP0000001329183.957276.4706
ENSFCAG00000009350felis_catusENSFCAP0000000867283.050873.3051capra_hircusENSCHIP0000000884981.327871.7842
ENSFCAG00000009350felis_catusENSFCAP0000000867213.13565.50847mus_caroliMGP_CAROLIEiJ_P007590417.41577.30337
ENSFCAG00000009350felis_catusENSFCAP0000000867283.898377.1186monodon_monocerosENSMMNP0001502425484.255377.4468
ENSFCAG00000009350felis_catusENSFCAP0000000867277.542463.9831heterocephalus_glaber_femaleENSHGLP0000000196875.308662.1399
ENSFCAG00000009350felis_catusENSFCAP0000000867280.508568.6441mus_musculusENSMUSP0000010820582.969470.7424
ENSFCAG00000009350felis_catusENSFCAP0000000867287.288179.661aotus_nancymaaeENSANAP0000001993183.064575.8064
ENSFCAG00000009350felis_catusENSFCAP0000000867286.440774.1525bos_grunniensENSBGRP0000001554686.440774.1525
ENSFCAG00000009350felis_catusENSFCAP0000000867282.203468.6441monodelphis_domesticaENSMODP0000002245382.553268.9362
ENSFCAG00000009350felis_catusENSFCAP0000000867288.98382.2034balaenoptera_musculusENSBMSP0001002596788.98382.2034
ENSFCAG00000009350felis_catusENSFCAP0000000867280.084770.339ovis_aries_rambouilletENSOARP0002001095182.532872.4891
ENSFCAG00000009350felis_catusENSFCAP0000000867269.067861.4407procavia_capensisENSPCAP0000000812887.165877.5401
ENSFCAG00000009350felis_catusENSFCAP0000000867282.627173.7288oryctolagus_cuniculusENSOCUP0000002111573.033765.1685
ENSFCAG00000009350felis_catusENSFCAP0000000867241.525433.4746mus_pahariMGP_PahariEiJ_P005219080.991765.2893
ENSFCAG00000009350felis_catusENSFCAP0000000867281.779770.339vombatus_ursinusENSVURP0001002311383.91372.1739
ENSFCAG00000009350felis_catusENSFCAP0000000867289.406883.0508rhinolophus_ferrumequinumENSRFEP0001000658689.406883.0508
ENSFCAG00000009350felis_catusENSFCAP0000000867286.864479.2373otolemur_garnettiiENSOGAP0000002011086.864479.2373
ENSFCAG00000009350felis_catusENSFCAP0000000867284.32277.9661phocoena_sinusENSPSNP0000001419484.680978.2979
ENSFCAG00000009350felis_catusENSFCAP0000000867286.440774.5763bos_taurusENSBTAP0000001954486.440774.5763
ENSFCAG00000009350felis_catusENSFCAP0000000867274.152569.0678pteropus_vampyrusENSPVAP0000001009075.107369.9571
ENSFCAG00000009350felis_catusENSFCAP0000000867284.32272.0339phascolarctos_cinereusENSPCIP0000003228984.32272.0339
ENSFCAG00000009350felis_catusENSFCAP0000000867253.813649.1525carlito_syrichtaENSTSYP0000002632790.070982.2695
ENSFCAG00000009350felis_catusENSFCAP0000000867279.66167.3729cavia_porcellusENSCPOP0000002713479.66167.3729
ENSFCAG00000009350felis_catusENSFCAP0000000867238.559334.7458microtus_ochrogasterENSMOCP0000001762880.53172.5664
ENSFCAG00000009350felis_catusENSFCAP0000000867284.32276.6949urocitellus_parryiiENSUPAP0001002797386.521778.6957
ENSFCAG00000009350felis_catusENSFCAP0000000867232.203428.8136octodon_degusENSODEP0000000147477.55169.3878
ENSFCAG00000009350felis_catusENSFCAP0000000867291.949284.7458ursus_maritimusENSUMAP0000002263988.934481.9672
ENSFCAG00000009350felis_catusENSFCAP0000000867281.355970.7627nannospalax_galiliENSNGAP0000002430183.842872.9258
ENSFCAG00000009350felis_catusENSFCAP0000000867288.135681.7797rhinopithecus_bietiENSRBIP0000001413188.135681.7797
ENSFCAG00000009350felis_catusENSFCAP0000000867266.101758.8983ictidomys_tridecemlineatusENSSTOP0000001605389.142979.4286
ENSFCAG00000009350felis_catusENSFCAP0000000867274.152559.322dipodomys_ordiiENSDORP0000002189582.159665.7277
ENSFCAG00000009350felis_catusENSFCAP0000000867271.186467.3729chlorocebus_sabaeusENSCSAP0000000606387.958183.2461
ENSFCAG00000009350felis_catusENSFCAP0000000867210099.5763panthera_tigris_altaicaENSPTIP0000002404910099.5763
ENSFCAG00000009350felis_catusENSFCAP0000000867286.440775.8475moschus_moschiferusENSMMSP0000003077986.440775.8475
ENSFCAG00000009350felis_catusENSFCAP0000000867249.576340.678sorex_araneusENSSARP0000001080589.31373.2824
ENSFCAG00000009350felis_catusENSFCAP0000000867261.864450.4237sorex_araneusENSSARP0000000003085.380169.5906
ENSFCAG00000009350felis_catusENSFCAP0000000867278.389866.9492rattus_norvegicusENSRNOP0000009468161.872952.8428
ENSFCAG00000009350felis_catusENSFCAP0000000867287.711981.3559sus_scrofaENSSSCP0000000070987.711981.3559
ENSFCAG00000009350felis_catusENSFCAP0000000867287.288181.3559physeter_catodonENSPCTP0000502590487.288181.3559
ENSFCAG00000009350felis_catusENSFCAP0000000867279.66170.7627tupaia_belangeriENSTBEP0000000868280.341971.3675
ENSFCAG00000009350felis_catusENSFCAP0000000867255.084748.3051ochotona_princepsENSOPRP0000000868873.033764.0449
ENSFCAG00000009350felis_catusENSFCAP0000000867280.084769.0678chinchilla_lanigeraENSCLAP0000002138482.173970.8696
ENSFCAG00000009350felis_catusENSFCAP0000000867286.864479.2373cebus_imitatorENSCCAP0000000901386.864479.2373
ENSFCAG00000009350felis_catusENSFCAP0000000867286.440774.5763bos_indicus_hybridENSBIXP0000503301986.440774.5763
ENSFCAG00000009350felis_catusENSFCAP0000000867286.01774.1525bison_bison_bisonENSBBBP0000000778586.01774.1525
ENSFCAG00000009350felis_catusENSFCAP0000000867280.508569.0678cricetulus_griseus_chok1gshdENSCGRP0000100895682.969471.179
ENSFCAG00000009350felis_catusENSFCAP0000000867288.135681.7797nomascus_leucogenysENSNLEP0000000647188.135681.7797
ENSFCAG00000009350felis_catusENSFCAP0000000867287.288180.5085canis_lupus_dingoENSCAFP0002000424986.192579.4979
ENSFCAG00000009350felis_catusENSFCAP0000000867288.559382.2034prolemur_simusENSPSMP0000000705486.363680.1653
ENSFCAG00000009350felis_catusENSFCAP0000000867287.288179.661catagonus_wagneriENSCWAP0000000922787.288179.661
ENSFCAG00000009350felis_catusENSFCAP0000000867288.135680.5085camelus_dromedariusENSCDRP0000503128188.135680.5085
ENSFCAG00000009350felis_catusENSFCAP0000000867286.440774.1525bos_mutusENSBMUP0000000764986.440774.1525
ENSFCAG00000009350felis_catusENSFCAP0000000867284.32273.3051cervus_hanglu_yarkandensisENSCHYP0000002733882.231471.4876
ENSFCAG00000009350felis_catusENSFCAP0000000867279.66174.5763jaculus_jaculusENSJJAP0000002188582.096176.8559
ENSFCAG00000009350felis_catusENSFCAP0000000867288.135681.7797rhinopithecus_roxellanaENSRROP0000001910188.135681.7797
ENSFCAG00000009350felis_catusENSFCAP0000000867299.576399.1525panthera_leoENSPLOP0000000612199.576399.1525
ENSFCAG00000009350felis_catusENSFCAP0000000867293.220386.017neovison_visonENSNVIP0000001063793.220386.017
ENSFCAG00000009350felis_catusENSFCAP0000000867279.66168.2203peromyscus_maniculatus_bairdiiENSPEMP0000002826382.096170.3057
ENSFCAG00000009350felis_catusENSFCAP0000000867277.118665.678mus_spicilegusENSMSIP0000003471773.684262.753
ENSFCAG00000009350felis_catusENSFCAP0000000867288.135682.2034microcebus_murinusENSMICP0000005027088.135682.2034
ENSFCAG00000009350felis_catusENSFCAP0000000867289.830583.4746sciurus_vulgarisENSSVLP0000500221089.830583.4746
ENSFCAG00000009350felis_catusENSFCAP0000000867284.32277.9661propithecus_coquereliENSPCOP0000000585088.053181.4159
ENSFCAG00000009350felis_catusENSFCAP0000000867234.32224.1525crocodylus_porosusENSCPRP0000501789753.642437.7483
ENSFCAG00000009350felis_catusENSFCAP0000000867252.542438.9831crocodylus_porosusENSCPRP0000500089756.880742.2018
ENSFCAG00000009350felis_catusENSFCAP0000000867256.355939.4068chrysemys_picta_belliiENSCPBP0000001990858.333340.7895
ENSFCAG00000009350felis_catusENSFCAP0000000867252.542439.8305chrysemys_picta_belliiENSCPBP0000001992250.202438.0567
ENSFCAG00000009350felis_catusENSFCAP0000000867259.745842.7966chrysemys_picta_belliiENSCPBP0000001990938.84327.8237
ENSFCAG00000009350felis_catusENSFCAP0000000867251.694936.0169chrysemys_picta_belliiENSCPBP0000002438053.744537.4449
ENSFCAG00000009350felis_catusENSFCAP0000000867254.237337.7119chrysemys_picta_belliiENSCPBP0000001992152.892636.7769
ENSFCAG00000009350felis_catusENSFCAP0000000867256.355938.9831chrysemys_picta_belliiENSCPBP000000199035034.5865
ENSFCAG00000009350felis_catusENSFCAP0000000867253.813640.2542sphenodon_punctatusENSSPUP0000001178048.846236.5385
ENSFCAG00000009350felis_catusENSFCAP0000000867247.457634.322anas_platyrhynchos_platyrhynchosENSAPLP0000002399557.142941.3265
ENSFCAG00000009350felis_catusENSFCAP0000000867252.118636.8644serinus_canariaENSSCAP0000002124763.402144.8454
ENSFCAG00000009350felis_catusENSFCAP0000000867238.983125.8475parus_majorENSPMJP0000000410145.09829.902
ENSFCAG00000009350felis_catusENSFCAP0000000867248.305136.0169parus_majorENSPMJP0000000409853.27139.7196
ENSFCAG00000009350felis_catusENSFCAP0000000867247.457633.0508anolis_carolinensisENSACAP0000003641651.141635.6164
ENSFCAG00000009350felis_catusENSFCAP0000000867238.559326.2712podarcis_muralisENSPMRP0000003437548.924733.3333
ENSFCAG00000009350felis_catusENSFCAP0000000867242.796628.3898podarcis_muralisENSPMRP0000003438646.330330.7339
ENSFCAG00000009350felis_catusENSFCAP0000000867240.254223.3051struthio_camelus_australisENSSCUP0000002537241.666724.1228
ENSFCAG00000009350felis_catusENSFCAP0000000867241.949227.1186pelodiscus_sinensisENSPSIP0000001432231.132120.1258
ENSFCAG00000009350felis_catusENSFCAP0000000867254.66138.1356pelodiscus_sinensisENSPSIP0000001405955.844238.961
ENSFCAG00000009350felis_catusENSFCAP0000000867244.915336.8644terrapene_carolina_triunguisENSTMTP0000002225054.081644.3878
ENSFCAG00000009350felis_catusENSFCAP0000000867232.627121.6102terrapene_carolina_triunguisENSTMTP0000000482359.689939.5349
ENSFCAG00000009350felis_catusENSFCAP0000000867242.372929.661terrapene_carolina_triunguisENSTMTP0000002616356.179839.3258
ENSFCAG00000009350felis_catusENSFCAP0000000867243.644130.0847terrapene_carolina_triunguisENSTMTP0000001747046.188331.8386
ENSFCAG00000009350felis_catusENSFCAP0000000867245.762731.7797terrapene_carolina_triunguisENSTMTP0000002190127.763519.2802
ENSFCAG00000009350felis_catusENSFCAP0000000867239.830526.2712taeniopygia_guttataENSTGUP0000003543838.683125.5144
ENSFCAG00000009350felis_catusENSFCAP000000086725036.8644taeniopygia_guttataENSTGUP0000001350952.678638.8393
ENSFCAG00000009350felis_catusENSFCAP0000000867243.644127.1186salvator_merianaeENSSMRP0000000565053.926733.5079
ENSFCAG00000009350felis_catusENSFCAP0000000867240.254230.5085salvator_merianaeENSSMRP0000000567055.882442.3529
ENSFCAG00000009350felis_catusENSFCAP0000000867245.762733.8983ficedula_albicollisENSFALP0000001768556.544541.8848
ENSFCAG00000009350felis_catusENSFCAP0000000867235.593225.4237ficedula_albicollisENSFALP0000003123141.79129.8507
ENSFCAG00000009350felis_catusENSFCAP0000000867238.983124.5763strigops_habroptilaENSSHBP0000502250149.197931.016
ENSFCAG00000009350felis_catusENSFCAP0000000867244.491531.7797strigops_habroptilaENSSHBP0000502249966.455747.4684
ENSFCAG00000009350felis_catusENSFCAP0000000867247.457633.4746geospiza_fortisENSGFOP0000001614046.861933.0544
ENSFCAG00000009350felis_catusENSFCAP0000000867242.372930.0847chelonoidis_abingdoniiENSCABP0000001705048.076934.1346
ENSFCAG00000009350felis_catusENSFCAP0000000867239.830527.9661chelonoidis_abingdoniiENSCABP0000001699542.727330
ENSFCAG00000009350felis_catusENSFCAP0000000867252.542434.7458chelonoidis_abingdoniiENSCABP0000001702344.444429.3907
ENSFCAG00000009350felis_catusENSFCAP0000000867250.847535.1695chelonoidis_abingdoniiENSCABP0000001702462.827243.4555
ENSFCAG00000009350felis_catusENSFCAP0000000867252.118636.4407chelonoidis_abingdoniiENSCABP0000001704560.891142.5743
ENSFCAG00000009350felis_catusENSFCAP0000000867248.728840.2542chelonoidis_abingdoniiENSCABP0000001705558.673548.4694
ENSFCAG00000009350felis_catusENSFCAP0000000867254.66138.5593chelonoidis_abingdoniiENSCABP0000001702763.861445.0495
ENSFCAG00000009350felis_catusENSFCAP0000000867252.542436.0169gopherus_evgoodeiENSGEVP0000500176153.91336.9565
ENSFCAG00000009350felis_catusENSFCAP0000000867252.542438.1356gopherus_evgoodeiENSGEVP0000500156052.542438.1356
ENSFCAG00000009350felis_catusENSFCAP0000000867243.644133.8983gopherus_evgoodeiENSGEVP0000500152444.017134.188
ENSFCAG00000009350felis_catusENSFCAP0000000867253.813637.7119gopherus_evgoodeiENSGEVP0000500158962.871344.0594
ENSFCAG00000009350felis_catusENSFCAP0000000867232.203421.1864anser_brachyrhynchusENSABRP0000001544255.072536.2319
ENSFCAG00000009350felis_catusENSFCAP0000000867248.728833.4746aquila_chrysaetos_chrysaetosENSACCP0002002468050.660834.8018
ENSFCAG00000009350felis_catusENSFCAP0000000867241.525425.4237aquila_chrysaetos_chrysaetosENSACCP0002002467849.746230.4569

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression