Description

Ensembl ID ENSENLG00000009144 Gene ID Accession -
Symbol Alias - Full Name 5'-3' exoribonuclease 1
Status Confidence Length 17577 bases Strand Plus strand
Position 17 : 3961861 - 3979437 RNA binding domain SH3_12 , XRN_N , XRN1_D1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSENLP00000027600 SH3_12 PF18129 1.3e-17 1
ENSENLP00000027600 XRN_N PF03159 1.1e-94 2
ENSENLP00000027600 XRN1_D1 PF18332 7.3e-27 3
ENSENLP00000027629 SH3_12 PF18129 1.3e-17 1
ENSENLP00000027629 XRN_N PF03159 1.1e-94 2
ENSENLP00000027629 XRN1_D1 PF18332 1.4e-14 3
ENSENLP00000027484 SH3_12 PF18129 1.6e-17 1
ENSENLP00000027484 XRN_N PF03159 1.3e-94 2
ENSENLP00000027484 XRN1_D1 PF18332 5.4e-22 3
ENSENLP00000027448 SH3_12 PF18129 1.6e-17 1
ENSENLP00000027448 XRN_N PF03159 1.1e-94 2
ENSENLP00000027448 XRN1_D1 PF18332 8.1e-27 3
ENSENLP00000027421 SH3_12 PF18129 1.6e-17 1
ENSENLP00000027421 XRN_N PF03159 1.2e-94 2
ENSENLP00000027421 XRN1_D1 PF18332 7.6e-27 3
ENSENLP00000027672 SH3_12 PF18129 1.1e-07 1
ENSENLP00000027672 XRN_N PF03159 8.7e-95 2
ENSENLP00000027672 XRN1_D1 PF18332 4.4e-27 3
ENSENLP00000027744 XRN_N PF03159 6.5e-95 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSENLT00000028254 4854 1617aa ENSENLP00000027421
- ENSENLT00000028281 4596 1531aa ENSENLP00000027448
- ENSENLT00000028317 4551 1516aa ENSENLP00000027484
- ENSENLT00000028433 3918 1305aa ENSENLP00000027600
- ENSENLT00000028463 3837 1278aa ENSENLP00000027629
- ENSENLT00000028506 3363 1120aa ENSENLP00000027672
- ENSENLT00000028581 2802 933aa ENSENLP00000027744

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSENLG00000009144

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSENLG00000009144

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression