Description

Ensembl ID ENSENLG00000005546 Gene ID 115037755 Accession -
Symbol Alias - Full Name cleavage and polyadenylation specificity factor subunit 3-like
Status Confidence Length 5311 bases Strand Minus strand
Position 24 : 1770245 - 1775555 RNA binding domain Lactamase_B , Beta-Casp , CPSF73-100_C , RMMBL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSENLP00000011556 Lactamase_B PF00753 2.6e-18 1
ENSENLP00000011556 Beta-Casp PF10996 1.7e-31 2
ENSENLP00000011556 RMMBL PF07521 5.3e-15 3
ENSENLP00000011540 Lactamase_B PF00753 4.7e-18 1
ENSENLP00000011540 Beta-Casp PF10996 2.7e-31 2
ENSENLP00000011540 CPSF73-100_C PF11718 2.7e-47 3
ENSENLP00000011540 CPSF73-100_C PF11718 2.7e-47 4
ENSENLP00000011540 RMMBL PF07521 8.2e-15 5
ENSENLP00000011548 Lactamase_B PF00753 4.7e-18 1
ENSENLP00000011548 Beta-Casp PF10996 2.7e-31 2
ENSENLP00000011548 CPSF73-100_C PF11718 5.5e-39 3
ENSENLP00000011548 RMMBL PF07521 8.1e-15 4
ENSENLP00000011529 Lactamase_B PF00753 4.8e-18 1
ENSENLP00000011529 Beta-Casp PF10996 2.9e-31 2
ENSENLP00000011529 CPSF73-100_C PF11718 9.7e-53 3
ENSENLP00000011529 RMMBL PF07521 8.5e-15 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSENLT00000012032 2443 686aa ENSENLP00000011529
- ENSENLT00000012043 2383 666aa ENSENLP00000011540
- ENSENLT00000012051 2107 667aa ENSENLP00000011548
- ENSENLT00000012060 1579 491aa ENSENLP00000011556

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSENLG00000005546

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSENLG00000005546

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression