RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSELUG00000021245	Gene ID		Accession	-
Symbol	eif4ebp3	Alias	-	Full Name	Esox lucius eukaryotic translation initiation factor 4E binding protein 3 (eif4ebp3), mRNA.
Status	Confidence	Length	3291 bases	Strand	Minus strand
Position	LG07 : 4475990 - 4479280	RNA binding domain	eIF_4EBP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSELUP00000022253	eIF_4EBP	PF05456	6.5e-36	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
eif4ebp3-201	ENSELUT00000033158	963	109aa	ENSELUP00000022253

Gene Model

Click here to download ENSELUG00000021245's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSELUG00000021245's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSELUG00000021245	esox_lucius	ENSELUP00000035107	52.3438	42.9688	esox_lucius	ENSELUP00000022253	61.4679	50.4587
ENSELUG00000021245	esox_lucius	ENSELUP00000062427	55.9322	46.6102	esox_lucius	ENSELUP00000022253	60.5505	50.4587
ENSELUG00000021245	esox_lucius	ENSELUP00000067383	43.8202	38.764	esox_lucius	ENSELUP00000022253	71.5596	63.3028

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	52.2936	33.945	drosophila_melanogaster	FBpp0077213	48.7179	31.6239
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	58.7156	44.9541	ciona_intestinalis	ENSCINP00000030219	55.1724	42.2414
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	52.2936	35.7798	ciona_intestinalis	ENSCINP00000020143	31.1475	21.3115
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	54.1284	44.0367	callorhinchus_milii	ENSCMIP00000014766	52.2124	42.4779
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	64.2202	56.8807	latimeria_chalumnae	ENSLACP00000018711	62.5	55.3571
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	67.8899	62.3853	lepisosteus_oculatus	ENSLOCP00000015383	81.3187	74.7253
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	80.7339	64.2202	clupea_harengus	ENSCHAP00000013925	69.8413	55.5556
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	68.8073	60.5505	danio_rerio	ENSDARP00000071668	72.1154	63.4615
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	66.9725	56.8807	carassius_auratus	ENSCARP00000118633	72.2772	61.3861
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	61.4679	51.3761	carassius_auratus	ENSCARP00000128348	48.9051	40.8759
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	62.3853	52.2936	carassius_auratus	ENSCARP00000101223	55.7377	46.7213
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	77.0642	65.1376	astyanax_mexicanus	ENSAMXP00000007619	77.7778	65.7407
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	71.5596	58.7156	ictalurus_punctatus	ENSIPUP00000030448	71.5596	58.7156
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	79.8165	66.055	electrophorus_electricus	ENSEEEP00000038185	79.0909	65.4545
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	59.633	53.211	callithrix_jacchus	ENSCJAP00000030809	65	58
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	42.2018	34.8624	sarcophilus_harrisii	ENSSHAP00000030294	48.4211	40
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	44.0367	34.8624	chrysemys_picta_bellii	ENSCPBP00000009829	34.2857	27.1429
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	60.5505	54.1284	pongo_abelii	ENSPPYP00000027255	66	59
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	60.5505	54.1284	homo_sapiens	ENSP00000308472	66	59
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	49.5413	42.2018	oryctolagus_cuniculus	ENSOCUP00000033115	53.4653	45.5446
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	50.4587	cavia_porcellus	ENSCPOP00000032744	63	55
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	60.5505	53.211	vulpes_vulpes	ENSVVUP00000016793	65.3465	57.4257
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	44.0367	33.0275	vulpes_vulpes	ENSVVUP00000021091	46.1538	34.6154
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	60.5505	53.211	ursus_americanus	ENSUAMP00000006071	65.3465	57.4257
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	42.2018	34.8624	anas_platyrhynchos_platyrhynchos	ENSAPLP00000025453	45.098	37.2549
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	41.2844	34.8624	meleagris_gallopavo	ENSMGAP00000024606	48.913	41.3043
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	56.8807	47.7064	cricetulus_griseus_chok1gshd	ENSCGRP00001012899	61.3861	51.4851
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	53.211	47.7064	bison_bison_bison	ENSBBBP00000003223	57.4257	51.4851
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	45.8716	40.367	bos_taurus	ENSBTAP00000056609	48.0769	42.3077
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	55.9633	49.5413	balaenoptera_musculus	ENSBMSP00010001182	61	54
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	44.9541	36.6972	sphenodon_punctatus	ENSSPUP00000020387	28.9941	23.6686
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	72.4771	66.055	oncorhynchus_mykiss	ENSOMYP00000060598	71.8182	65.4545
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	90.8257	85.3211	oncorhynchus_mykiss	ENSOMYP00000105563	90	84.5455
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	50.4587	41.2844	monodelphis_domestica	ENSMODP00000054981	55.5556	45.4545
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	58.7156	49.5413	mus_musculus	ENSMUSP00000039298	63.3663	53.4653
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	50.4587	urocitellus_parryii	ENSUPAP00010009311	62.3762	54.4554
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	49.5413	mus_pahari	MGP_PahariEiJ_P0039000	62.3762	53.4653
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	50.4587	42.2018	capra_hircus	ENSCHIP00000032774	53.9216	45.098
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	78.8991	68.8073	salmo_trutta	ENSSTUP00000012600	79.6296	69.4444
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	88.0734	82.5688	salmo_trutta	ENSSTUP00000074114	87.2727	81.8182
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	59.633	52.2936	jaculus_jaculus	ENSJJAP00000014065	65	57
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	77.9817	68.8073	pygocentrus_nattereri	ENSPNAP00000005172	77.9817	68.8073
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	56.8807	50.4587	sus_scrofa	ENSSSCP00000024979	61.3861	54.4554
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	58.7156	50.4587	mus_spicilegus	ENSMSIP00000038007	63.3663	54.4554
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	62.3853	48.6239	ciona_savignyi	ENSCSAVP00000013070	21.7252	16.9329
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	59.633	52.2936	canis_lupus_familiaris	ENSCAFP00845002364	65	57
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	56.8807	48.6239	monodon_monoceros	ENSMMNP00015001408	61.3861	52.4752
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	47.7064	mesocricetus_auratus	ENSMAUP00000015763	62.3762	51.4851
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	58.7156	50.4587	mus_spretus	MGP_SPRETEiJ_P0048326	63.3663	54.4554
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	87.156	79.8165	salmo_salar	ENSSSAP00000014086	69.8529	63.9706
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	80.7339	72.4771	salmo_salar	ENSSSAP00000073966	79.2793	71.1712
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	69.7248	62.3853	erpetoichthys_calabaricus	ENSECRP00000028271	67.2566	60.177
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	50.4587	marmota_marmota_marmota	ENSMMMP00000011853	62.3762	54.4554
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	59.633	51.3761	chinchilla_lanigera	ENSCLAP00000004775	65	56
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	49.5413	mus_caroli	MGP_CAROLIEiJ_P0046401	62.3762	53.4653
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	47.7064	39.4495	chelonoidis_abingdonii	ENSCABP00000025790	49.5238	40.9524
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	50.4587	dipodomys_ordii	ENSDORP00000019890	62.3762	54.4554
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	47.7064	microtus_ochrogaster	ENSMOCP00000025232	63	52
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	60.5505	53.211	ailuropoda_melanoleuca	ENSAMEP00000028859	65.3465	57.4257
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	46.789	38.5321	phascolarctos_cinereus	ENSPCIP00000023019	52.5773	43.299
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	58.7156	51.3761	sciurus_vulgaris	ENSSVLP00005028106	64	56
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	55.0459	45.8716	phocoena_sinus	ENSPSNP00000015472	59.4059	49.505
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	60.5505	54.1284	camelus_dromedarius	ENSCDRP00005028594	65.3465	58.4158
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	53.211	47.7064	bos_mutus	ENSBMUP00000020169	57.4257	51.4851
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	51.3761	cervus_hanglu_yarkandensis	ENSCHYP00000029866	62.3762	55.4455
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	59.633	52.2936	heterocephalus_glaber_female	ENSHGLP00000049882	65	57
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	47.7064	39.4495	gopherus_evgoodei	ENSGEVP00005023326	49.5238	40.9524
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	49.5413	carlito_syrichta	ENSTSYP00000029578	63	54
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	55.9633	48.6239	physeter_catodon	ENSPCTP00005026585	61	53
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	50.4587	ictidomys_tridecemlineatus	ENSSTOP00000022827	62.3762	54.4554
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	59.633	52.2936	panthera_leo	ENSPLOP00000002666	65	57
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	50.4587	nannospalax_galili	ENSNGAP00000015284	43.75	38.1944
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	60.5505	53.211	ursus_maritimus	ENSUMAP00000018071	65.3465	57.4257
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	59.633	50.4587	peromyscus_maniculatus_bairdii	ENSPEMP00000035731	64.3564	54.4554
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	50.4587	catagonus_wagneri	ENSCWAP00000011748	61.7647	53.9216
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	53.211	47.7064	bos_grunniens	ENSBGRP00000026596	57.4257	51.4851
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	58.7156	51.3761	chlorocebus_sabaeus	ENSCSAP00000009006	64	56
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	90.8257	85.3211	oncorhynchus_tshawytscha	ENSOTSP00005075376	90	84.5455
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	77.9817	74.3119	oncorhynchus_tshawytscha	ENSOTSP00005041340	77.2727	73.6364
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	66.9725	55.9633	sinocyclocheilus_grahami	ENSSGRP00000005786	72.2772	60.396
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	66.9725	58.7156	sinocyclocheilus_grahami	ENSSGRP00000105036	46.4968	40.7643
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	59.633	52.2936	octodon_degus	ENSODEP00000005326	65	57
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	53.211	44.9541	ovis_aries_rambouillet	ENSOARP00020028509	56.3107	47.5728
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	57.7982	51.3761	vombatus_ursinus	ENSVURP00010022766	63	56
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	52.2936	47.7064	bos_indicus_hybrid	ENSBIXP00005009651	57	52
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	90.8257	85.3211	oncorhynchus_kisutch	ENSOKIP00005062194	90	84.5455
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	54.1284	47.7064	equus_asinus	ENSEASP00005047157	50	44.0678
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	58.7156	51.3761	neovison_vison	ENSNVIP00000017515	64	56
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	61.4679	54.1284	rhinolophus_ferrumequinum	ENSRFEP00010018122	66.3366	58.4158
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	73.3945	61.4679	paramormyrops_kingsleyae	ENSPKIP00000021313	57.554	48.2014
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	60.5505	53.211	propithecus_coquereli	ENSPCOP00000006304	65.3465	57.4257
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	59.633	52.2936	canis_lupus_dingo	ENSCAFP00020002278	65	57
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	67.8899	58.7156	cyprinus_carpio_carpio	ENSCCRP00000122112	42.5287	36.7816
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	59.633	51.3761	cyprinus_carpio_carpio	ENSCCRP00000149356	68.4211	58.9474
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	60.5505	53.211	panthera_pardus	ENSPPRP00000001841	65.3465	57.4257
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	60.5505	53.211	panthera_tigris_altaica	ENSPTIP00000009954	65.3465	57.4257
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	72.4771	63.3028	hucho_hucho	ENSHHUP00000073808	68.1034	59.4828
ENSELUG00000021245	esox_lucius	ENSELUP00000022253	92.6606	85.3211	hucho_hucho	ENSHHUP00000031375	91.8182	84.5455

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression