| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSELUG00000021216 | Gene ID |
105008921 |
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
serrate RNA effector molecule homolog |
| Status |
Confidence |
Length |
22805 bases |
Strand |
Minus strand |
| Position |
LG24 : 196812 - 219616 |
RNA binding domain |
ARS2 , SERRATE_Ars2_N |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSELUP00000040668 |
ARS2 |
PF04959 |
4.8e-80 |
1 |
| ENSELUP00000040668 |
SERRATE_Ars2_N |
PF12066 |
5.4e-38 |
2 |
| ENSELUP00000022238 |
ARS2 |
PF04959 |
2e-79 |
1 |
| ENSELUP00000022238 |
SERRATE_Ars2_N |
PF12066 |
1.1e-33 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSELUT00000033147 |
3029 |
884aa |
ENSELUP00000040668 |
| - |
ENSELUT00000042186 |
2454 |
691aa |
ENSELUP00000022238 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000005653 | 71.8818 | 60.6127 | esox_lucius | ENSELUP00000040668 | 74.3213 | 62.6697 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 45.4751 | 31.6742 | caenorhabditis_elegans | E01A2.2a.1 | 56.4607 | 39.3258 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 56.7873 | 42.6471 | drosophila_melanogaster | FBpp0085356 | 53.2344 | 39.9788 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 55.9955 | 41.2896 | ciona_intestinalis | ENSCINP00000007200 | 57.7596 | 42.5904 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 67.3077 | 52.6018 | petromyzon_marinus | ENSPMAP00000010575 | 70.4976 | 55.0948 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 48.8688 | 39.819 | eptatretus_burgeri | ENSEBUP00000013517 | 64 | 52.1481 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 14.5928 | 12.2172 | poecilia_reticulata | ENSPREP00000020943 | 64.8241 | 54.2714 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 78.2805 | 69.9095 | gadus_morhua | ENSGMOP00000036827 | 82.4791 | 73.6591 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 16.1765 | 14.1403 | haplochromis_burtoni | ENSHBUP00000018894 | 72.2222 | 63.1313 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 81.2217 | 70.5882 | astatotilapia_calliptera | ENSACLP00000013782 | 82.5287 | 71.7241 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 76.81 | 66.7421 | xiphophorus_maculatus | ENSXMAP00000002094 | 82.8049 | 71.9512 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 76.6968 | 66.4027 | sparus_aurata | ENSSAUP00010023426 | 78.2007 | 67.7047 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 79.7511 | 69.5701 | kryptolebias_marmoratus | ENSKMAP00000011266 | 81.2212 | 70.8525 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 42.3077 | 36.5385 | cyclopterus_lumpus | ENSCLMP00005033485 | 78.903 | 68.1435 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 42.6471 | 36.7647 | fundulus_heteroclitus | ENSFHEP00000023228 | 80.5556 | 69.4444 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 80.9955 | 72.1719 | lates_calcarifer | ENSLCAP00010054619 | 75.3684 | 67.1579 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 14.7059 | 13.2353 | lates_calcarifer | ENSLCAP00010019817 | 75.1445 | 67.6301 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 77.4887 | 68.6652 | oryzias_melastigma | ENSOMEP00000005923 | 81.9378 | 72.6077 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 54.8643 | 40.1584 | ciona_savignyi | ENSCSAVP00000014334 | 53.7694 | 39.357 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 40.2715 | 35.0679 | seriola_dumerili | ENSSDUP00000002660 | 78.2418 | 68.1319 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 54.9774 | 47.0588 | labrus_bergylta | ENSLBEP00000038807 | 75.819 | 64.8986 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 76.6968 | 66.629 | cynoglossus_semilaevis | ENSCSEP00000008177 | 82.7839 | 71.917 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 76.5837 | 66.7421 | poecilia_latipinna | ENSPLAP00000021075 | 83.3744 | 72.6601 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 72.2851 | 62.2172 | hippocampus_comes | ENSHCOP00000007017 | 80.8861 | 69.6203 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 62.4434 | 55.543 | mastacembelus_armatus | ENSMAMP00000015728 | 80.4665 | 71.5743 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 60.9729 | 53.1674 | myripristis_murdjan | ENSMMDP00005041555 | 78.6861 | 68.6131 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 81.448 | 70.8145 | oreochromis_niloticus | ENSONIP00000020257 | 82.8539 | 72.0368 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 81.5611 | 72.5113 | dicentrarchus_labrax | ENSDLAP00005075365 | 73.198 | 65.0761 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 17.4208 | 15.2715 | acanthochromis_polyacanthus | ENSAPOP00000025508 | 79.7927 | 69.9482 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 54.8643 | 47.9638 | larimichthys_crocea | ENSLCRP00005038410 | 68.7943 | 60.1418 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 81.3348 | 71.4932 | amphiprion_ocellaris | ENSAOCP00000023239 | 83.4107 | 73.3179 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 22.9638 | 19.0045 | oryzias_javanicus | ENSOJAP00000033893 | 60.4167 | 50 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 19.1176 | 17.3077 | oryzias_javanicus | ENSOJAP00000033881 | 77.5229 | 70.1835 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 17.3077 | 15.3846 | neolamprologus_brichardi | ENSNBRP00000031465 | 84.0659 | 74.7253 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 65.1584 | 57.8054 | sander_lucioperca | ENSSLUP00000009866 | 71.8204 | 63.7157 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 79.8643 | 69.9095 | betta_splendens | ENSBSLP00000002166 | 81.713 | 71.5278 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 81.3348 | 71.4932 | amphiprion_percula | ENSAPEP00000028214 | 83.4107 | 73.3179 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 57.4661 | 49.4344 | nothobranchius_furzeri | ENSNFUP00015024318 | 79.8742 | 68.7107 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 66.0633 | 59.1629 | scophthalmus_maximus | ENSSMAP00000029708 | 84.6377 | 75.7971 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 17.7602 | 15.3846 | amphilophus_citrinellus | ENSACIP00000011142 | 77.7228 | 67.3267 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 77.2624 | 67.7602 | gasterosteus_aculeatus | ENSGACP00000001428 | 78.3257 | 68.6927 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 17.1946 | 15.4977 | pundamilia_nyererei | ENSPNYP00000013781 | 83.5165 | 75.2747 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 75.2262 | 65.724 | stegastes_partitus | ENSSPAP00000025082 | 82.302 | 71.9059 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 45.1357 | 38.5747 | anabas_testudineus | ENSATEP00000052706 | 72.8102 | 62.2263 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 30.9955 | 26.4706 | tetraodon_nigroviridis | ENSTNIP00000000412 | 82.0359 | 70.0599 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 76.3575 | 66.0633 | tetraodon_nigroviridis | ENSTNIP00000000912 | 77.4971 | 67.0494 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 74.2081 | 65.2715 | cyprinodon_variegatus | ENSCVAP00000029517 | 81.7955 | 71.9451 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 76.5837 | 66.7421 | poecilia_formosa | ENSPFOP00000016651 | 82.9657 | 72.3039 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 81.3348 | 70.7014 | maylandia_zebra | ENSMZEP00005037547 | 82.6437 | 71.8391 |
| ENSELUG00000021216 | esox_lucius | ENSELUP00000040668 | 12.5566 | 10.7466 | seriola_lalandi_dorsalis | ENSSLDP00000024205 | 71.6129 | 61.2903 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
