RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSELUG00000011452	Gene ID	105024129	Accession	-
Symbol	rnaset2l	Alias	-	Full Name	ribonuclease Oy
Status	Confidence	Length	13819 bases	Strand	Plus strand
Position	LG01 : 12966173 - 12979991	RNA binding domain	Ribonuclease_T2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSELUP00000033276	Ribonuclease_T2	PF00445	5.6e-40	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
rnaset2l-201	ENSELUT00000001159	1039	264aa	ENSELUP00000033276

Gene Model

Click here to download ENSELUG00000011452's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSELUG00000011452's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSELUG00000011452	esox_lucius	ENSELUP00000039170	42.3237	27.3859	esox_lucius	ENSELUP00000033276	38.6364	25

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	37.1212	21.5909	caenorhabditis_elegans	K10C9.3.1	35.1254	20.4301
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	40.5303	24.2424	drosophila_melanogaster	FBpp0076469	32.9231	19.6923
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	40.1515	24.6212	ciona_intestinalis	ENSCINP00000030837	42.915	26.3158
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	40.9091	23.4848	callorhinchus_milii	ENSCMIP00000009331	69.2308	39.7436
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	45.4545	36.7424	lepisosteus_oculatus	ENSLOCP00000018088	70.1754	56.7251
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	59.8485	45.8333	danio_rerio	ENSDARP00000075733	68.9956	52.8384
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	60.6061	43.5606	carassius_auratus	ENSCARP00000048400	61.3027	44.0613
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	62.8788	48.4848	astyanax_mexicanus	ENSAMXP00000037728	62.8788	48.4848
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	61.3636	48.1061	ictalurus_punctatus	ENSIPUP00000010988	62.3077	48.8462
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	65.1515	49.6212	electrophorus_electricus	ENSEEEP00000052412	65.3992	49.8099
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	66.6667	51.8939	poecilia_reticulata	ENSPREP00000009821	65.4275	50.9294
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	62.1212	47.7273	gadus_morhua	ENSGMOP00000057549	61.194	47.0149
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	56.4394	42.4242	chrysemys_picta_bellii	ENSCPBP00000008880	61.0656	45.9016
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	67.0455	51.1364	astatotilapia_calliptera	ENSACLP00000016251	65.5556	50
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	68.1818	53.0303	xiphophorus_maculatus	ENSXMAP00000033977	52.1739	40.5797
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	63.6364	51.8939	sparus_aurata	ENSSAUP00010000252	62.9213	51.3109
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	56.0606	43.9394	takifugu_rubripes	ENSTRUP00000056156	69.1589	54.2056
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	63.6364	51.5152	cyclopterus_lumpus	ENSCLMP00005009064	62.4535	50.5576
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	54.9242	39.3939	sphenodon_punctatus	ENSSPUP00000015219	59.9174	42.9752
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	62.5	51.1364	fundulus_heteroclitus	ENSFHEP00000011041	56.5069	46.2329
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	78.0303	69.3182	oncorhynchus_mykiss	ENSOMYP00000097403	79.845	70.9302
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	83.7121	75.7576	oncorhynchus_mykiss	ENSOMYP00000056155	80.9524	73.2601
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	62.1212	50.3788	oryzias_latipes	ENSORLP00000030607	61.194	49.6269
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	82.9545	75	salmo_trutta	ENSSTUP00000010337	83.908	75.8621
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	60.9848	48.1061	pygocentrus_nattereri	ENSPNAP00000004506	72.1973	56.9507
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	62.1212	48.4848	oryzias_melastigma	ENSOMEP00000018050	57.7465	45.0704
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	40.9091	26.5152	ciona_savignyi	ENSCSAVP00000011340	40.9091	26.5152
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	44.3182	29.5455	anolis_carolinensis	ENSACAP00000037043	39.661	26.4407
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	65.5303	55.6818	cottoperca_gobio	ENSCGOP00000032239	65.283	55.4717
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	82.5758	75	salmo_salar	ENSSSAP00000047267	83.5249	75.8621
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	63.6364	46.5909	erpetoichthys_calabaricus	ENSECRP00000026586	66.6667	48.8095
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	53.0303	43.9394	seriola_dumerili	ENSSDUP00000019915	66.0377	54.717
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	53.4091	39.0152	labrus_bergylta	ENSLBEP00000021073	62.6667	45.7778
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	35.6061	21.5909	saccharomyces_cerevisiae	YPL123C	21.659	13.1336
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	57.5758	43.5606	cynoglossus_semilaevis	ENSCSEP00000024634	59.8425	45.2756
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	67.0455	50.3788	poecilia_latipinna	ENSPLAP00000025800	65.3137	49.0775
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	62.1212	48.8636	hippocampus_comes	ENSHCOP00000019535	43.5013	34.2175
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	65.1515	53.0303	mastacembelus_armatus	ENSMAMP00000029409	65.3992	53.2319
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	51.5152	38.2576	naja_naja	ENSNNAP00000026144	53.9683	40.0794
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	57.5758	42.803	oreochromis_niloticus	ENSONIP00000001389	46.9136	34.8765
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	64.3939	53.7879	dicentrarchus_labrax	ENSDLAP00005028561	61.3718	51.2635
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	46.5909	38.6364	acanthochromis_polyacanthus	ENSAPOP00000010540	69.8864	57.9545
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	65.5303	51.8939	larimichthys_crocea	ENSLCRP00005020015	55.4487	43.9103
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	49.6212	40.9091	amphiprion_ocellaris	ENSAOCP00000027366	64.2157	52.9412
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	64.7727	50.7576	oryzias_javanicus	ENSOJAP00000011088	63.806	50
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	61.7424	46.2121	neolamprologus_brichardi	ENSNBRP00000006359	63.9216	47.8431
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	56.8182	41.2879	gopherus_evgoodei	ENSGEVP00005008151	61.4754	44.6721
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	54.5455	39.0152	salvator_merianae	ENSSMRP00000019713	57.6	41.2
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	64.3939	51.8939	amphiprion_percula	ENSAPEP00000029783	62.5	50.3676
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	64.3939	51.5152	scophthalmus_maximus	ENSSMAP00000007625	57.8231	46.2585
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	60.2273	45.8333	pundamilia_nyererei	ENSPNYP00000012241	64.898	49.3878
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	67.4242	55.303	stegastes_partitus	ENSSPAP00000013739	65.2015	53.4799
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	82.9545	75	oncorhynchus_tshawytscha	ENSOTSP00005039545	83.908	75.8621
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	79.1667	70.8333	oncorhynchus_tshawytscha	ENSOTSP00005034531	81.9608	73.3333
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	59.4697	44.697	sinocyclocheilus_grahami	ENSSGRP00000021030	61.5686	46.2745
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	52.6515	38.2576	podarcis_muralis	ENSPMRP00000021684	54.5098	39.6078
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	77.6515	69.697	oncorhynchus_kisutch	ENSOKIP00005074274	80.3922	72.1569
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	83.3333	75	oncorhynchus_kisutch	ENSOKIP00005087760	84.2912	75.8621
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	65.1515	53.0303	anabas_testudineus	ENSATEP00000003894	64.9057	52.8302
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	66.6667	51.8939	paramormyrops_kingsleyae	ENSPKIP00000022051	69.0196	53.7255
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	42.4242	34.8485	tetraodon_nigroviridis	ENSTNIP00000003987	58.0311	47.6684
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	58.7121	44.3182	cyprinus_carpio_carpio	ENSCCRP00000119027	59.387	44.8276
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	52.6515	39.3939	denticeps_clupeoides	ENSDCDP00000012775	53.0534	39.6947
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	64.7727	50.3788	cyprinodon_variegatus	ENSCVAP00000023834	60.424	46.9965
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	67.4242	51.5152	poecilia_formosa	ENSPFOP00000000627	65.6827	50.1845
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	67.0455	51.1364	maylandia_zebra	ENSMZEP00005000039	65.5556	50
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	53.7879	44.697	seriola_lalandi_dorsalis	ENSSLDP00000010388	65.4378	54.3779
ENSELUG00000011452	esox_lucius	ENSELUP00000033276	71.5909	62.8788	hucho_hucho	ENSHHUP00000084491	69.7417	61.2546

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression