Description

Ensembl ID ENSEGOG00005013736 Gene ID Accession -
Symbol Alias - Full Name 5'-3' exoribonuclease 1
Status Confidence Length 31627 bases Strand Minus strand
Position QUSF01000034.1 : 4153359 - 4184985 RNA binding domain SH3_12 , XRN_N , XRN1_D1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSEGOP00005017286 SH3_12 PF18129 6.2e-20 1
ENSEGOP00005017286 XRN_N PF03159 2.4e-94 2
ENSEGOP00005017286 XRN1_D1 PF18332 7.3e-33 3
ENSEGOP00005017271 SH3_12 PF18129 6.3e-20 1
ENSEGOP00005017271 XRN_N PF03159 1.9e-94 2
ENSEGOP00005017271 XRN1_D1 PF18332 8e-33 3
ENSEGOP00005017288 SH3_12 PF18129 6.3e-20 1
ENSEGOP00005017288 XRN_N PF03159 2e-94 2
ENSEGOP00005017288 XRN1_D1 PF18332 4.6e-29 3
ENSEGOP00005017290 XRN_N PF03159 1.3e-94 1
ENSEGOP00005017290 XRN1_D1 PF18332 5e-06 2
ENSEGOP00005017292 XRN1_D1 PF18332 1.6e-29 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSEGOT00005019869 4899 1632aa ENSEGOP00005017271
- ENSEGOT00005019886 4860 1619aa ENSEGOP00005017286
- ENSEGOT00005019889 4848 1615aa ENSEGOP00005017288
- ENSEGOT00005019891 2886 961aa ENSEGOP00005017290
- ENSEGOT00005019893 1236 411aa ENSEGOP00005017292

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSEGOG00005013736

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSEGOG00005013736

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression