RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSEGOG00005013736 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
5'-3' exoribonuclease 1 |
Status |
Confidence |
Length |
31627 bases |
Strand |
Minus strand |
Position |
QUSF01000034.1 : 4153359 - 4184985 |
RNA binding domain |
SH3_12 , XRN_N , XRN1_D1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSEGOP00005017286 |
SH3_12 |
PF18129 |
6.2e-20 |
1 |
ENSEGOP00005017286 |
XRN_N |
PF03159 |
2.4e-94 |
2 |
ENSEGOP00005017286 |
XRN1_D1 |
PF18332 |
7.3e-33 |
3 |
ENSEGOP00005017271 |
SH3_12 |
PF18129 |
6.3e-20 |
1 |
ENSEGOP00005017271 |
XRN_N |
PF03159 |
1.9e-94 |
2 |
ENSEGOP00005017271 |
XRN1_D1 |
PF18332 |
8e-33 |
3 |
ENSEGOP00005017288 |
SH3_12 |
PF18129 |
6.3e-20 |
1 |
ENSEGOP00005017288 |
XRN_N |
PF03159 |
2e-94 |
2 |
ENSEGOP00005017288 |
XRN1_D1 |
PF18332 |
4.6e-29 |
3 |
ENSEGOP00005017290 |
XRN_N |
PF03159 |
1.3e-94 |
1 |
ENSEGOP00005017290 |
XRN1_D1 |
PF18332 |
5e-06 |
2 |
ENSEGOP00005017292 |
XRN1_D1 |
PF18332 |
1.6e-29 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSEGOT00005019869 |
4899 |
1632aa |
ENSEGOP00005017271 |
- |
ENSEGOT00005019886 |
4860 |
1619aa |
ENSEGOP00005017286 |
- |
ENSEGOT00005019889 |
4848 |
1615aa |
ENSEGOP00005017288 |
- |
ENSEGOT00005019891 |
2886 |
961aa |
ENSEGOP00005017290 |
- |
ENSEGOT00005019893 |
1236 |
411aa |
ENSEGOP00005017292 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSEGOG00005013736 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSEGOG00005013736 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |