RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSECAG00000005497	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2673 bases	Strand	Plus strand
Position	7 : 47812576 - 47815248	RNA binding domain	zf-met
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSECAP00000003909	zf-met	PF12874	5e-18	1
ENSECAP00000003909	zf-met	PF12874	5e-18	2
ENSECAP00000003909	zf-met	PF12874	5e-18	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSECAT00000005545	2092	412aa	ENSECAP00000003909

Gene Model

Click here to download ENSECAG00000005497's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSECAG00000005497's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSECAG00000005497	equus_caballus	ENSECAP00000081590	55.5178	47.8778	equus_caballus	ENSECAP00000003909	79.3689	68.4466
ENSECAG00000005497	equus_caballus	ENSECAP00000065395	41.8103	36.8534	equus_caballus	ENSECAP00000003909	47.0874	41.5049
ENSECAG00000005497	equus_caballus	ENSECAP00000087352	46.4062	39.8438	equus_caballus	ENSECAP00000003909	72.0874	61.8932
ENSECAG00000005497	equus_caballus	ENSECAP00000057590	45.6681	37.7386	equus_caballus	ENSECAP00000003909	75.4854	62.3786
ENSECAG00000005497	equus_caballus	ENSECAP00000069414	48.6971	40.228	equus_caballus	ENSECAP00000003909	72.5728	59.9515
ENSECAG00000005497	equus_caballus	ENSECAP00000052389	45.7014	39.3665	equus_caballus	ENSECAP00000003909	73.5437	63.3495
ENSECAG00000005497	equus_caballus	ENSECAP00000053359	46.077	38.5164	equus_caballus	ENSECAP00000003909	78.3981	65.534
ENSECAG00000005497	equus_caballus	ENSECAP00000080383	53.0792	45.7478	equus_caballus	ENSECAP00000003909	43.932	37.8641
ENSECAG00000005497	equus_caballus	ENSECAP00000047528	49.1497	41.4966	equus_caballus	ENSECAP00000003909	70.1456	59.2233
ENSECAG00000005497	equus_caballus	ENSECAP00000016589	42.7097	36.5161	equus_caballus	ENSECAP00000003909	80.3398	68.6893
ENSECAG00000005497	equus_caballus	ENSECAP00000052588	52.1569	43.9216	equus_caballus	ENSECAP00000003909	64.5631	54.3689
ENSECAG00000005497	equus_caballus	ENSECAP00000071339	39.2345	32.7751	equus_caballus	ENSECAP00000003909	79.6116	66.5049
ENSECAG00000005497	equus_caballus	ENSECAP00000088756	54.1494	46.473	equus_caballus	ENSECAP00000003909	63.3495	54.3689
ENSECAG00000005497	equus_caballus	ENSECAP00000057579	40.8587	34.626	equus_caballus	ENSECAP00000003909	71.6019	60.6796
ENSECAG00000005497	equus_caballus	ENSECAP00000069391	45.7271	38.6807	equus_caballus	ENSECAP00000003909	74.0291	62.6214
ENSECAG00000005497	equus_caballus	ENSECAP00000090437	20.8955	16.4179	equus_caballus	ENSECAP00000003909	6.79612	5.33981
ENSECAG00000005497	equus_caballus	ENSECAP00000062996	62.8297	54.9161	equus_caballus	ENSECAP00000003909	63.5922	55.5825
ENSECAG00000005497	equus_caballus	ENSECAP00000077066	56.0714	48.3929	equus_caballus	ENSECAP00000003909	76.2136	65.7767
ENSECAG00000005497	equus_caballus	ENSECAP00000086267	39.5833	31.25	equus_caballus	ENSECAP00000003909	9.2233	7.28155
ENSECAG00000005497	equus_caballus	ENSECAP00000014975	43.6751	37.6831	equus_caballus	ENSECAP00000003909	79.6116	68.6893
ENSECAG00000005497	equus_caballus	ENSECAP00000083419	34.0909	26.9481	equus_caballus	ENSECAP00000003909	25.4854	20.1456
ENSECAG00000005497	equus_caballus	ENSECAP00000088378	50.4013	43.4992	equus_caballus	ENSECAP00000003909	76.2136	65.7767
ENSECAG00000005497	equus_caballus	ENSECAP00000067576	44.3681	37.5	equus_caballus	ENSECAP00000003909	78.3981	66.2621
ENSECAG00000005497	equus_caballus	ENSECAP00000061647	49.2284	41.9753	equus_caballus	ENSECAP00000003909	77.4272	66.0194
ENSECAG00000005497	equus_caballus	ENSECAP00000072168	46.7057	39.0922	equus_caballus	ENSECAP00000003909	77.4272	64.8058
ENSECAG00000005497	equus_caballus	ENSECAP00000087175	62.6106	51.7699	equus_caballus	ENSECAP00000003909	68.6893	56.7961
ENSECAG00000005497	equus_caballus	ENSECAP00000081221	50.5423	41.2148	equus_caballus	ENSECAP00000003909	56.5534	46.1165
ENSECAG00000005497	equus_caballus	ENSECAP00000088122	57.9137	49.2806	equus_caballus	ENSECAP00000003909	78.1553	66.5049
ENSECAG00000005497	equus_caballus	ENSECAP00000085927	43.188	36.376	equus_caballus	ENSECAP00000003909	76.9417	64.8058
ENSECAG00000005497	equus_caballus	ENSECAP00000015710	43.0657	36.2044	equus_caballus	ENSECAP00000003909	71.6019	60.1942
ENSECAG00000005497	equus_caballus	ENSECAP00000077297	40.6932	35.1733	equus_caballus	ENSECAP00000003909	76.9417	66.5049
ENSECAG00000005497	equus_caballus	ENSECAP00000014409	47.1014	40.5797	equus_caballus	ENSECAP00000003909	78.8835	67.9612
ENSECAG00000005497	equus_caballus	ENSECAP00000070611	18.75	12.5	equus_caballus	ENSECAP00000003909	3.64078	2.42718
ENSECAG00000005497	equus_caballus	ENSECAP00000013837	49.6333	41.5648	equus_caballus	ENSECAP00000003909	49.2718	41.2621
ENSECAG00000005497	equus_caballus	ENSECAP00000061787	44.8758	38.5093	equus_caballus	ENSECAP00000003909	70.1456	60.1942
ENSECAG00000005497	equus_caballus	ENSECAP00000070020	73.0435	60	equus_caballus	ENSECAP00000003909	20.3883	16.7476
ENSECAG00000005497	equus_caballus	ENSECAP00000080698	39.6746	33.6671	equus_caballus	ENSECAP00000003909	76.9417	65.2913
ENSECAG00000005497	equus_caballus	ENSECAP00000089475	74.1688	62.9156	equus_caballus	ENSECAP00000003909	70.3884	59.7087
ENSECAG00000005497	equus_caballus	ENSECAP00000063522	29.3689	23.7864	equus_caballus	ENSECAP00000003909	29.3689	23.7864
ENSECAG00000005497	equus_caballus	ENSECAP00000052596	49.226	41.0217	equus_caballus	ENSECAP00000003909	77.1845	64.3204
ENSECAG00000005497	equus_caballus	ENSECAP00000008489	40.1325	32.7152	equus_caballus	ENSECAP00000003909	73.5437	59.9515
ENSECAG00000005497	equus_caballus	ENSECAP00000056698	58.0645	48.9564	equus_caballus	ENSECAP00000003909	74.2718	62.6214
ENSECAG00000005497	equus_caballus	ENSECAP00000074428	51.8911	44.9319	equus_caballus	ENSECAP00000003909	83.2524	72.0874
ENSECAG00000005497	equus_caballus	ENSECAP00000089277	36.076	28.6076	equus_caballus	ENSECAP00000003909	69.1748	54.8544
ENSECAG00000005497	equus_caballus	ENSECAP00000049586	48.2818	38.6598	equus_caballus	ENSECAP00000003909	68.2039	54.6117
ENSECAG00000005497	equus_caballus	ENSECAP00000047682	50.9158	41.9414	equus_caballus	ENSECAP00000003909	67.4757	55.5825
ENSECAG00000005497	equus_caballus	ENSECAP00000087199	41.9714	34.8172	equus_caballus	ENSECAP00000003909	64.0777	53.1553
ENSECAG00000005497	equus_caballus	ENSECAP00000084760	67.655	55.5256	equus_caballus	ENSECAP00000003909	60.9223	50
ENSECAG00000005497	equus_caballus	ENSECAP00000076535	44.898	36.3265	equus_caballus	ENSECAP00000003909	53.3981	43.2039
ENSECAG00000005497	equus_caballus	ENSECAP00000089209	45.5102	36.5306	equus_caballus	ENSECAP00000003909	54.1262	43.4466
ENSECAG00000005497	equus_caballus	ENSECAP00000063758	61.1111	45.9877	equus_caballus	ENSECAP00000003909	48.0583	36.165
ENSECAG00000005497	equus_caballus	ENSECAP00000067154	40.3454	30.1413	equus_caballus	ENSECAP00000003909	62.3786	46.6019
ENSECAG00000005497	equus_caballus	ENSECAP00000024725	38.3562	31.5068	equus_caballus	ENSECAP00000003909	40.7767	33.4951
ENSECAG00000005497	equus_caballus	ENSECAP00000035782	40.7051	33.0128	equus_caballus	ENSECAP00000003909	61.6505	50
ENSECAG00000005497	equus_caballus	ENSECAP00000060873	68.7657	59.6977	equus_caballus	ENSECAP00000003909	66.2621	57.5243
ENSECAG00000005497	equus_caballus	ENSECAP00000066485	47.2843	37.0607	equus_caballus	ENSECAP00000003909	35.9223	28.1553
ENSECAG00000005497	equus_caballus	ENSECAP00000072651	25.974	11.6883	equus_caballus	ENSECAP00000003909	4.85437	2.18447

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	67.9612	54.3689	tursiops_truncatus	ENSTTRP00000000723	54.902	43.9216
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	72.0874	59.466	tursiops_truncatus	ENSTTRP00000010001	46.9937	38.7658
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	64.8058	52.1845	delphinapterus_leucas	ENSDLEP00000013428	54.6012	43.9673
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	5.33981	3.64078	delphinapterus_leucas	ENSDLEP00000024272	24.7191	16.8539
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	57.5243	46.8447	delphinapterus_leucas	ENSDLEP00000013416	42.5494	34.6499
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	5.33981	3.39806	balaenoptera_musculus	ENSBMSP00010012572	28.9474	18.4211
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	100	99.5146	equus_asinus	ENSEASP00005046383	92.7928	92.3423
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	5.58252	4.61165	ovis_aries_rambouillet	ENSOARP00020000415	34.8485	28.7879
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	57.767	43.6893	urocitellus_parryii	ENSUPAP00010009440	48.1781	36.4372
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	63.1068	50.9709	camelus_dromedarius	ENSCDRP00005032660	49.3359	39.8482
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	4.85437	3.8835	bison_bison_bison	ENSBBBP00000010210	32.2581	25.8065
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	71.1165	57.0388	phocoena_sinus	ENSPSNP00000000675	52.7928	42.3423
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	5.58252	3.64078	phocoena_sinus	ENSPSNP00000011520	25.8427	16.8539
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	7.03884	6.31068	phocoena_sinus	ENSPSNP00000000653	38.6667	34.6667
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	54.1262	43.4466	phocoena_sinus	ENSPSNP00000000634	44.4223	35.6574
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	52.9126	42.4757	dipodomys_ordii	ENSDORP00000023824	50.2304	40.3226
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	2.91262	2.42718	prolemur_simus	ENSPSMP00000018950	20.6897	17.2414
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	5.09709	4.36893	cervus_hanglu_yarkandensis	ENSCHYP00000032285	33.871	29.0323
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	60.9223	48.7864	chinchilla_lanigera	ENSCLAP00000009357	48.3622	38.7283
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	22.3301	16.0194	petromyzon_marinus	ENSPMAP00000007400	48.4211	34.7368
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	52.9126	36.6505	eptatretus_burgeri	ENSEBUP00000019346	36.394	25.2087
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	34.2233	22.3301	salmo_trutta	ENSSTUP00000051570	37.2032	24.2744
ENSECAG00000005497	equus_caballus	ENSECAP00000003909	33.9806	24.5146	cottoperca_gobio	ENSCGOP00000034921	37.4332	27.0053

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression