RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSECAG00000000538	Gene ID		Accession	-
Symbol	ZNF385B	Alias	-	Full Name	zinc finger protein 385B
Status	Confidence	Length	433378 bases	Strand	Minus strand
Position	18 : 57523571 - 57956948	RNA binding domain	zf-C2H2_jaz , zf-met
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
ENSECAP00000000425	zf-C2H2_jaz	PF12171	1.5e-15	1
ENSECAP00000000425	zf-met	PF12874	1.5e-20	2
ENSECAP00000000425	zf-met	PF12874	1.5e-20	3
ENSECAP00000000425	zf-met	PF12874	1.5e-20	4
ENSECAP00000032539	zf-C2H2_jaz	PF12171	1.7e-21	1
ENSECAP00000032539	zf-C2H2_jaz	PF12171	1.7e-21	2
ENSECAP00000032539	zf-met	PF12874	5.3e-28	3
ENSECAP00000032539	zf-met	PF12874	5.3e-28	4
ENSECAP00000032539	zf-met	PF12874	5.3e-28	5
ENSECAP00000032539	zf-met	PF12874	5.3e-28	6
ENSECAP00000039161	zf-C2H2_jaz	PF12171	7.7e-06	1
ENSECAP00000039161	zf-met	PF12874	1.3e-07	2
ENSECAP00000042361	zf-C2H2_jaz	PF12171	2.8e-05	1
ENSECAP00000042361	zf-met	PF12874	4.2e-07	2
ENSECAP00000046035	zf-C2H2_jaz	PF12171	1.7e-21	1
ENSECAP00000046035	zf-C2H2_jaz	PF12171	1.7e-21	2
ENSECAP00000046035	zf-met	PF12874	5.3e-28	3
ENSECAP00000046035	zf-met	PF12874	5.3e-28	4
ENSECAP00000046035	zf-met	PF12874	5.3e-28	5
ENSECAP00000046035	zf-met	PF12874	5.3e-28	6
ENSECAP00000069231	zf-C2H2_jaz	PF12171	1.9e-21	1
ENSECAP00000069231	zf-C2H2_jaz	PF12171	1.9e-21	2
ENSECAP00000069231	zf-met	PF12874	5.8e-28	3
ENSECAP00000069231	zf-met	PF12874	5.8e-28	4
ENSECAP00000069231	zf-met	PF12874	5.8e-28	5
ENSECAP00000069231	zf-met	PF12874	5.8e-28	6
ENSECAP00000078122	zf-C2H2_jaz	PF12171	1.3e-16	1
ENSECAP00000078122	zf-C2H2_jaz	PF12171	1.3e-16	2
ENSECAP00000078122	zf-met	PF12874	2.3e-21	3
ENSECAP00000078122	zf-met	PF12874	2.3e-21	4
ENSECAP00000078122	zf-met	PF12874	2.3e-21	5
ENSECAP00000078413	zf-C2H2_jaz	PF12171	7.9e-06	1
ENSECAP00000078413	zf-met	PF12874	1.3e-07	2
ENSECAP00000082376	zf-C2H2_jaz	PF12171	1.6e-15	1
ENSECAP00000082376	zf-C2H2_jaz	PF12171	1.6e-15	2
ENSECAP00000082376	zf-met	PF12874	2.1e-21	3
ENSECAP00000082376	zf-met	PF12874	2.1e-21	4
ENSECAP00000082376	zf-met	PF12874	2.1e-21	5

Showing 1 to 38 of 38 entries

Pubmed ID	Full Name	Cell	Author	Time	Doi
No data available in table

Pubmed ID	Title	Author	Time	Journal
No data available in table

Transcripts

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Search:

Name	Transcript ID	bp	Protein	Translation ID
ZNF385B-201	ENSECAT00000000545	2766	395aa	ENSECAP00000000425
ZNF385B-202	ENSECAT00000127341	2811	505aa	ENSECAP00000069231
ZNF385B-203	ENSECAT00000085842	2661	455aa	ENSECAP00000078122
ZNF385B-204	ENSECAT00000114709	2895	533aa	ENSECAP00000082376
ZNF385B-205	ENSECAT00000038105	2772	492aa	ENSECAP00000046035
ZNF385B-206	ENSECAT00000050363	2772	492aa	ENSECAP00000032539
ZNF385B-207	ENSECAT00000122018	15902	118aa	ENSECAP00000078413
ZNF385B-208	ENSECAT00000057917	1460	271aa	ENSECAP00000042361
ZNF385B-209	ENSECAT00000056522	691	132aa	ENSECAP00000039161

Showing 1 to 9 of 9 entries

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Gene Model

Click here to download ENSECAG00000000538's gene model file

ensgID	Trait	pValue	Pubmed ID
No data available in table

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID
No data available in table

Protein-Protein Interaction (PPI)

Click here to download ENSECAG00000000538's PPI file

Paralogs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSECAG00000000538	equus_caballus	ENSECAP00000042212	41.6327	25.7143	equus_caballus	ENSECAP00000082376	19.137	11.8199
ENSECAG00000000538	equus_caballus	ENSECAP00000006902	30.7692	16.3077	equus_caballus	ENSECAP00000082376	18.7617	9.94372
ENSECAG00000000538	equus_caballus	ENSECAP00000086606	32.9268	19.5122	equus_caballus	ENSECAP00000082376	15.197	9.00563
ENSECAG00000000538	equus_caballus	ENSECAP00000090150	25.4335	14.1618	equus_caballus	ENSECAP00000082376	16.5103	9.19325
ENSECAG00000000538	equus_caballus	ENSECAP00000012050	29.304	18.315	equus_caballus	ENSECAP00000082376	15.0094	9.38086
ENSECAG00000000538	equus_caballus	ENSECAP00000042465	16.0759	8.60759	equus_caballus	ENSECAP00000082376	23.8274	12.758
ENSECAG00000000538	equus_caballus	ENSECAP00000045393	55.4779	44.7552	equus_caballus	ENSECAP00000082376	44.6529	36.0225
ENSECAG00000000538	equus_caballus	ENSECAP00000062924	15.625	8.20312	equus_caballus	ENSECAP00000082376	7.50469	3.93996
ENSECAG00000000538	equus_caballus	ENSECAP00000034402	47.8102	36.4963	equus_caballus	ENSECAP00000082376	49.1557	37.5235
ENSECAG00000000538	equus_caballus	ENSECAP00000068658	66.5323	55.4436	equus_caballus	ENSECAP00000082376	61.9137	51.5947

Showing 1 to 10 of 10 entries

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Orthologs

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Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSECAG00000000538	equus_caballus	ENSECAP00000082376	84.4278	78.9869	ornithorhynchus_anatinus	ENSOANP00000043972	85.5513	80.038
ENSECAG00000000538	equus_caballus	ENSECAP00000082376	69.9812	67.7298	sarcophilus_harrisii	ENSSHAP00000017677	89.4484	86.5707
ENSECAG00000000538	equus_caballus	ENSECAP00000082376	67.167	62.8518	notamacropus_eugenii	ENSMEUP00000009149	80.0895	74.9441
ENSECAG00000000538	equus_caballus	ENSECAP00000082376	72.4203	71.2946	choloepus_hoffmanni	ENSCHOP00000010456	96.7419	95.2381
ENSECAG00000000538	equus_caballus	ENSECAP00000082376	50.0938	44.2777	dasypus_novemcinctus	ENSDNOP00000022159	79.7015	70.4478
ENSECAG00000000538	equus_caballus	ENSECAP00000082376	69.9812	67.167	erinaceus_europaeus	ENSEEUP00000007252	82.1586	78.8546
ENSECAG00000000538	equus_caballus	ENSECAP00000082376	69.9812	68.6679	echinops_telfairi	ENSETEP00000004489	79.1932	77.707
ENSECAG00000000538	equus_caballus	ENSECAP00000082376	91.182	88.9306	callithrix_jacchus	ENSCJAP00000043159	97.3948	94.99
ENSECAG00000000538	equus_caballus	ENSECAP00000082376	86.8668	85.9287	cercocebus_atys	ENSCATP00000008151	98.3015	97.2399
ENSECAG00000000538	equus_caballus	ENSECAP00000082376	89.4934	87.9925	macaca_fascicularis	ENSMFAP00000022681	98.1481	96.5021

Showing 1 to 10 of 227 entries

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Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression