RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSEBUG00000015135	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	5604 bases	Strand	Minus strand
Position	FYBX02010220.1 : 3163157 - 3168760	RNA binding domain	TDP43_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSEBUP00000024534	TDP43_N	PF18694	2.4e-06	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSEBUT00000025110	180	59aa	ENSEBUP00000024534

Gene Model

Click here to download ENSEBUG00000015135's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSEBUG00000015135's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSEBUG00000015135

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSEBUG00000015135

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression