| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSEBUG00000003908 | Gene ID |
|
Accession |
- |
| Symbol |
DDX47 |
Alias |
- |
Full Name |
DEAD-box helicase 47 |
| Status |
Confidence |
Length |
23685 bases |
Strand |
Plus strand |
| Position |
FYBX02009422.1 : 2821704 - 2845388 |
RNA binding domain |
ResIII , DEAD |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSEBUP00000005799 |
ResIII |
PF04851 |
1.5e-05 |
1 |
| ENSEBUP00000005799 |
DEAD |
PF00270 |
8.8e-48 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSEBUT00000006244 |
1551 |
281aa |
ENSEBUP00000005799 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000002718 | 19.279 | 11.9122 | eptatretus_burgeri | ENSEBUP00000005799 | 43.7722 | 27.0463 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000023415 | 19.9704 | 13.1657 | eptatretus_burgeri | ENSEBUP00000005799 | 48.0427 | 31.6726 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000026049 | 21.9436 | 16.3009 | eptatretus_burgeri | ENSEBUP00000005799 | 24.911 | 18.5053 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000004863 | 16.9839 | 13.0307 | eptatretus_burgeri | ENSEBUP00000005799 | 41.2811 | 31.6726 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000006844 | 27.7635 | 16.9666 | eptatretus_burgeri | ENSEBUP00000005799 | 38.4342 | 23.4875 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000001298 | 13.3255 | 8.84434 | eptatretus_burgeri | ENSEBUP00000005799 | 40.2135 | 26.6904 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000026673 | 19.9643 | 13.369 | eptatretus_burgeri | ENSEBUP00000005799 | 39.8577 | 26.6904 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000009760 | 12.9787 | 8.29787 | eptatretus_burgeri | ENSEBUP00000005799 | 21.7082 | 13.879 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000015932 | 19.6765 | 10.2426 | eptatretus_burgeri | ENSEBUP00000005799 | 25.9786 | 13.5231 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000010219 | 37.3239 | 23.2394 | eptatretus_burgeri | ENSEBUP00000005799 | 18.8612 | 11.7438 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000015589 | 13.9535 | 8.87949 | eptatretus_burgeri | ENSEBUP00000005799 | 23.4875 | 14.9466 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000013467 | 17.3913 | 10.4348 | eptatretus_burgeri | ENSEBUP00000005799 | 14.2349 | 8.54093 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000006543 | 16.3558 | 11.4778 | eptatretus_burgeri | ENSEBUP00000005799 | 40.5694 | 28.4698 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000015976 | 25.1716 | 15.3318 | eptatretus_burgeri | ENSEBUP00000005799 | 39.1459 | 23.8434 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000023906 | 16.0194 | 9.46602 | eptatretus_burgeri | ENSEBUP00000005799 | 23.4875 | 13.879 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000006040 | 24.8908 | 14.8472 | eptatretus_burgeri | ENSEBUP00000005799 | 20.2847 | 12.0996 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000012112 | 18.8272 | 11.1111 | eptatretus_burgeri | ENSEBUP00000005799 | 43.4164 | 25.6228 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000001226 | 18.618 | 11.1324 | eptatretus_burgeri | ENSEBUP00000005799 | 34.5196 | 20.6406 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000007344 | 17.4118 | 10.3529 | eptatretus_burgeri | ENSEBUP00000005799 | 26.3345 | 15.6584 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000006566 | 19.6309 | 13.5906 | eptatretus_burgeri | ENSEBUP00000005799 | 41.637 | 28.8256 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000018552 | 15.0121 | 9.56417 | eptatretus_burgeri | ENSEBUP00000005799 | 44.1281 | 28.1139 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000017374 | 18.5882 | 11.5294 | eptatretus_burgeri | ENSEBUP00000005799 | 28.1139 | 17.4377 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000011035 | 18.1364 | 11.8136 | eptatretus_burgeri | ENSEBUP00000005799 | 38.79 | 25.2669 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000012217 | 12.6984 | 8.39002 | eptatretus_burgeri | ENSEBUP00000005799 | 39.8577 | 26.3345 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000004778 | 23.0461 | 16.6333 | eptatretus_burgeri | ENSEBUP00000005799 | 40.9253 | 29.5374 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000000731 | 21.2355 | 15.0579 | eptatretus_burgeri | ENSEBUP00000005799 | 19.573 | 13.879 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000016138 | 13.2013 | 8.25082 | eptatretus_burgeri | ENSEBUP00000005799 | 14.2349 | 8.8968 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000021574 | 12.0805 | 7.55034 | eptatretus_burgeri | ENSEBUP00000005799 | 25.6228 | 16.0142 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000003967 | 0.887574 | 0.295858 | eptatretus_burgeri | ENSEBUP00000005799 | 1.06762 | 0.355872 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000015398 | 22.5389 | 14.7668 | eptatretus_burgeri | ENSEBUP00000005799 | 30.9609 | 20.2847 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000025609 | 17.1131 | 10.5655 | eptatretus_burgeri | ENSEBUP00000005799 | 40.9253 | 25.2669 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000014095 | 16.2393 | 11.2536 | eptatretus_burgeri | ENSEBUP00000005799 | 40.5694 | 28.1139 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000012028 | 25.4174 | 17.0686 | eptatretus_burgeri | ENSEBUP00000005799 | 48.7544 | 32.7402 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000005464 | 25 | 16.2037 | eptatretus_burgeri | ENSEBUP00000005799 | 38.4342 | 24.911 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000015867 | 19.4946 | 12.6354 | eptatretus_burgeri | ENSEBUP00000005799 | 38.4342 | 24.911 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000008521 | 11.1888 | 5.24476 | eptatretus_burgeri | ENSEBUP00000005799 | 11.3879 | 5.33808 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000005799 | 70.1068 | 51.9573 | caenorhabditis_elegans | T26G10.1.1 | 40.2863 | 29.8569 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000005799 | 72.9537 | 57.2954 | drosophila_melanogaster | FBpp0080997 | 40.4339 | 31.7554 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000005799 | 69.7509 | 54.4484 | ciona_savignyi | ENSCSAVP00000019725 | 43.9462 | 34.3049 |
| ENSEBUG00000003908 | eptatretus_burgeri | ENSEBUP00000005799 | 60.4982 | 42.3488 | saccharomyces_cerevisiae | YHR065C | 33.9321 | 23.7525 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
