Description

Ensembl ID ENSEASG00005000310 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 47504 bases Strand Minus strand
Position 25 : 9462349 - 9509852 RNA binding domain RRM_1 , TUDOR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSEASP00005000278 RRM_1 PF00076 3.2e-09 1
ENSEASP00005000278 TUDOR PF00567 7.4e-09 2
ENSEASP00005000282 RRM_1 PF00076 3.6e-09 1
ENSEASP00005000282 TUDOR PF00567 9.1e-09 2
ENSEASP00005000283 RRM_1 PF00076 1.3e-08 1
ENSEASP00005000283 TUDOR PF00567 6.7e-08 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSEAST00005000358 1669 348aa ENSEASP00005000278
- ENSEAST00005000362 1672 376aa ENSEASP00005000282
- ENSEAST00005000363 3800 945aa ENSEASP00005000283

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSEASG00005000310equus_asinusENSEASP000050539975.904582.88144equus_asinusENSEASP0000500028313.22756.45503
ENSEASG00005000310equus_asinusENSEASP000050245019.55114.68004equus_asinusENSEASP0000500028310.5825.18518
ENSEASG00005000310equus_asinusENSEASP0000500708515.71438.39286equus_asinusENSEASP000050002839.312174.97355
ENSEASG00005000310equus_asinusENSEASP000050379216.711763.22581equus_asinusENSEASP0000500028313.65086.56085
ENSEASG00005000310equus_asinusENSEASP000050332717.967774.2077equus_asinusENSEASP000050002839.417994.97355
ENSEASG00005000310equus_asinusENSEASP000050216579.121064.22886equus_asinusENSEASP0000500028311.64025.39683

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSEASG00005000310equus_asinusENSEASP0000500028326.984122.328sarcophilus_harrisiiENSSHAP0000003427760.714350.2381
ENSEASG00005000310equus_asinusENSEASP000050002832016.8254notamacropus_eugeniiENSMEUP0000000338255.917247.0414
ENSEASG00005000310equus_asinusENSEASP0000500028331.851928.9947callithrix_jacchusENSCJAP0000001748082.465875.0685
ENSEASG00005000310equus_asinusENSEASP0000500028330.793727.5132cercocebus_atysENSCATP0000003363181.971873.2394
ENSEASG00005000310equus_asinusENSEASP0000500028332.910129.8413macaca_fascicularisENSMFAP0000003193288.60480.3419
ENSEASG00005000310equus_asinusENSEASP0000500028332.910129.9471macaca_mulattaENSMMUP0000002567588.60480.6268
ENSEASG00005000310equus_asinusENSEASP0000500028332.063528.9947macaca_nemestrinaENSMNEP0000004283782.786974.8634
ENSEASG00005000310equus_asinusENSEASP0000500028332.38129.2063papio_anubisENSPANP0000002885276.691769.1729
ENSEASG00005000310equus_asinusENSEASP0000500028332.063528.8889mandrillus_leucophaeusENSMLEP0000002363082.786974.5902
ENSEASG00005000310equus_asinusENSEASP0000500028331.322828.1481gorilla_gorillaENSGGOP0000003593180.874372.6776
ENSEASG00005000310equus_asinusENSEASP0000500028331.322828.3598pan_paniscusENSPPAP0000000675881.095973.4247
ENSEASG00005000310equus_asinusENSEASP0000500028331.322828.4656pan_troglodytesENSPTRP0000007666980.874373.4973
ENSEASG00005000310equus_asinusENSEASP0000500028332.063529.2063pongo_abeliiENSPPYP0000000090786.324878.6325
ENSEASG00005000310equus_asinusENSEASP0000500028332.063529.3122homo_sapiensENSP0000035746786.324878.9174
ENSEASG00005000310equus_asinusENSEASP0000500028331.111128.6772tursiops_truncatusENSTTRP0000001327285.964979.2398
ENSEASG00005000310equus_asinusENSEASP0000500028333.862431.4286delphinapterus_leucasENSDLEP0000001405191.168184.6154
ENSEASG00005000310equus_asinusENSEASP0000500028333.650831.5344physeter_catodonENSPCTP0000501804890.857185.1429
ENSEASG00005000310equus_asinusENSEASP0000500028333.756631.3228balaenoptera_musculusENSBMSP0001000183191.142984.5714
ENSEASG00005000310equus_asinusENSEASP0000500028317.248715.5556loxodonta_africanaENSLAFP0000001214181.094573.1343
ENSEASG00005000310equus_asinusENSEASP0000500028332.804230.582sus_scrofaENSSSCP0000003587493.655687.3112
ENSEASG00005000310equus_asinusENSEASP0000500028334.074131.3228capra_hircusENSCHIP0000002577384.293277.4869
ENSEASG00005000310equus_asinusENSEASP0000500028334.603232.2751camelus_dromedariusENSCDRP0000502859793.162486.8946
ENSEASG00005000310equus_asinusENSEASP0000500028327.724923.2804phascolarctos_cinereusENSPCIP0000002921672.176360.6061
ENSEASG00005000310equus_asinusENSEASP0000500028333.015930.1587aotus_nancymaaeENSANAP0000002027588.888981.1966
ENSEASG00005000310equus_asinusENSEASP0000500028332.910130.8995catagonus_wagneriENSCWAP0000000164889.625484.1499
ENSEASG00005000310equus_asinusENSEASP0000500028329.735426.6667rhinopithecus_roxellanaENSRROP0000003607183.136174.5562
ENSEASG00005000310equus_asinusENSEASP0000500028331.428628.5714bos_indicus_hybridENSBIXP0000502983772.43965.8537
ENSEASG00005000310equus_asinusENSEASP0000500028320.634916.0847procavia_capensisENSPCAP0000000086856.521744.058
ENSEASG00005000310equus_asinusENSEASP0000500028329.841327.0899propithecus_coquereliENSPCOP0000003038976.630469.5652
ENSEASG00005000310equus_asinusENSEASP0000500028310.68789.52381tupaia_belangeriENSTBEP0000001085442.43737.8151
ENSEASG00005000310equus_asinusENSEASP0000500028340.529139.0476equus_caballusENSECAP0000002073660.220158.0189
ENSEASG00005000310equus_asinusENSEASP0000500028334.074131.3228ovis_aries_rambouilletENSOARP0002000255791.737984.3305
ENSEASG00005000310equus_asinusENSEASP0000500028326.984122.328monodelphis_domesticaENSMODP0000005374563.275452.3573
ENSEASG00005000310equus_asinusENSEASP0000500028333.968331.5344bos_taurusENSBTAP0000007382484.031478.0105
ENSEASG00005000310equus_asinusENSEASP0000500028331.216928.1481rhinolophus_ferrumequinumENSRFEP0001002940780.381572.4796
ENSEASG00005000310equus_asinusENSEASP0000500028330.687827.7249microcebus_murinusENSMICP0000000129680.332472.5762
ENSEASG00005000310equus_asinusENSEASP0000500028332.38129.1005rhinopithecus_bietiENSRBIP0000000823581.167172.9443
ENSEASG00005000310equus_asinusENSEASP0000500028331.428628.1481saimiri_boliviensis_boliviensisENSSBOP0000000350181.818273.2782
ENSEASG00005000310equus_asinusENSEASP0000500028331.851928.5714chlorocebus_sabaeusENSCSAP0000001608382.240473.7705
ENSEASG00005000310equus_asinusENSEASP0000500028333.756631.6402bos_grunniensENSBGRP0000001323090.883285.1852
ENSEASG00005000310equus_asinusENSEASP0000500028333.756631.6402bison_bison_bisonENSBBBP0000000510190.883285.1852
ENSEASG00005000310equus_asinusENSEASP0000500028330.687827.8307carlito_syrichtaENSTSYP0000001092579.670372.2527
ENSEASG00005000310equus_asinusENSEASP0000500028333.756631.3228phocoena_sinusENSPSNP0000000422890.883284.3305
ENSEASG00005000310equus_asinusENSEASP0000500028313.968312.381pteropus_vampyrusENSPVAP0000000447149.070643.4944
ENSEASG00005000310equus_asinusENSEASP0000500028333.756631.3228monodon_monocerosENSMMNP0001501903890.883284.3305
ENSEASG00005000310equus_asinusENSEASP0000500028333.650831.5344bos_mutusENSBMUP0000001426990.598384.9003
ENSEASG00005000310equus_asinusENSEASP0000500028327.301624.6561nomascus_leucogenysENSNLEP0000001383480.124272.3602
ENSEASG00005000310equus_asinusENSEASP0000500028331.957729.1005prolemur_simusENSPSMP0000003252582.739775.3425
ENSEASG00005000310equus_asinusENSEASP0000500028329.947126.5608myotis_lucifugusENSMLUP0000001612177.322468.5792
ENSEASG00005000310equus_asinusENSEASP0000500028333.54530.582moschus_moschiferusENSMMSP0000001409790.571482.5714
ENSEASG00005000310equus_asinusENSEASP0000500028331.957728.9947cebus_imitatorENSCCAP0000000740382.739775.0685
ENSEASG00005000310equus_asinusENSEASP0000500028311.21694.65608drosophila_melanogasterFBpp00715084.214711.7495
ENSEASG00005000310equus_asinusENSEASP000050002837.089952.96296drosophila_melanogasterFBpp007750911.63194.86111
ENSEASG00005000310equus_asinusENSEASP000050002836.031753.59788eptatretus_burgeriENSEBUP0000001876616.913910.089
ENSEASG00005000310equus_asinusENSEASP000050002838.677254.2328eptatretus_burgeriENSEBUP000000076245.924862.89017
ENSEASG00005000310equus_asinusENSEASP000050002836.772493.91534eptatretus_burgeriENSEBUP0000000451517.977510.3933
ENSEASG00005000310equus_asinusENSEASP0000500028321.587314.9206latimeria_chalumnaeENSLACP0000001676657.142939.4958
ENSEASG00005000310equus_asinusENSEASP000050002839.312174.7619lepisosteus_oculatusENSLOCP0000001401015.09437.7187
ENSEASG00005000310equus_asinusENSEASP000050002839.100534.2328danio_rerioENSDARP0000000509715.00876.9808
ENSEASG00005000310equus_asinusENSEASP000050002838.783074.02116carassius_auratusENSCARP000001119409.431824.31818
ENSEASG00005000310equus_asinusENSEASP000050002838.783074.02116carassius_auratusENSCARP000001198579.431824.31818
ENSEASG00005000310equus_asinusENSEASP000050002839.312174.65608astyanax_mexicanusENSAMXP000000376059.36174.68085
ENSEASG00005000310equus_asinusENSEASP000050002839.206354.65608ictalurus_punctatusENSIPUP000000141399.602654.85651
ENSEASG00005000310equus_asinusENSEASP000050002839.100534.44444electrophorus_electricusENSEEEP0000003372316.19597.9096
ENSEASG00005000310equus_asinusENSEASP000050002839.629634.7619esox_luciusENSELUP000000430078.650194.27757
ENSEASG00005000310equus_asinusENSEASP000050002839.417994.44444oncorhynchus_kisutchENSOKIP000050413619.270834.375
ENSEASG00005000310equus_asinusENSEASP000050002839.312174.44444oncorhynchus_mykissENSOMYP000000518528.870974.23387
ENSEASG00005000310equus_asinusENSEASP000050002839.523814.44444salmo_salarENSSSAP000000601849.365244.37045
ENSEASG00005000310equus_asinusENSEASP000050002838.359793.91534salmo_truttaENSSTUP000000414188.615054.0349
ENSEASG00005000310equus_asinusENSEASP000050002837.936514.12698gadus_morhuaENSGMOP0000000994613.22756.87831
ENSEASG00005000310equus_asinusENSEASP000050002838.359794.2328fundulus_heteroclitusENSFHEP0000000273514.36367.27273
ENSEASG00005000310equus_asinusENSEASP000050002837.830694.02116xiphophorus_maculatusENSXMAP0000001478813.72917.05009
ENSEASG00005000310equus_asinusENSEASP000050002837.513233.91534poecilia_reticulataENSPREP0000000613612.09546.30324
ENSEASG00005000310equus_asinusENSEASP000050002837.407413.80952cyclopterus_lumpusENSCLMP0000504904312.68126.52174
ENSEASG00005000310equus_asinusENSEASP000050002837.724874.12698oryzias_latipesENSORLP0000004502013.39457.15596
ENSEASG00005000310equus_asinusENSEASP000050002837.830693.80952oreochromis_niloticusENSONIP0000001709113.38166.50995
ENSEASG00005000310equus_asinusENSEASP000050002837.619053.7037haplochromis_burtoniENSHBUP0000001570913.01996.32911
ENSEASG00005000310equus_asinusENSEASP000050002837.724873.80952astatotilapia_callipteraENSACLP0000000450813.12956.47482
ENSEASG00005000310equus_asinusENSEASP000050002838.148154.02116sparus_aurataENSSAUP0001002996113.11756.47359
ENSEASG00005000310equus_asinusENSEASP0000500028324.656116.2963xenopus_tropicalisENSXETP0000004968332.005521.1538
ENSEASG00005000310equus_asinusENSEASP0000500028322.96316.5079chrysemys_picta_belliiENSCPBP0000003538362.716845.0867
ENSEASG00005000310equus_asinusENSEASP0000500028325.820118.5185crocodylus_porosusENSCPRP0000501971433.424723.9726
ENSEASG00005000310equus_asinusENSEASP000050002837.724876.24339sphenodon_punctatusENSSPUP0000000380551.77341.844
ENSEASG00005000310equus_asinusENSEASP0000500028312.80429.52381laticauda_laticaudataENSLLTP0000001095458.454143.4783
ENSEASG00005000310equus_asinusENSEASP0000500028315.87311.0053notechis_scutatusENSNSUP0000000730951.020435.3741
ENSEASG00005000310equus_asinusENSEASP000050002836.349213.1746cyprinodon_variegatusENSCVAP0000001720313.69866.84932
ENSEASG00005000310equus_asinusENSEASP000050002837.513233.7037larimichthys_croceaENSLCRP000050147178.43234.15677
ENSEASG00005000310equus_asinusENSEASP000050002838.253973.91534labrus_bergyltaENSLBEP0000003652213.68426.49123
ENSEASG00005000310equus_asinusENSEASP0000500028320.105814.8148naja_najaENSNNAP0000000591146.913634.5679
ENSEASG00005000310equus_asinusENSEASP0000500028312.3818.46561erpetoichthys_calabaricusENSECRP0000002652257.073239.0244
ENSEASG00005000310equus_asinusENSEASP000050002837.513234.12698cynoglossus_semilaevisENSCSEP0000000445612.54426.89046
ENSEASG00005000310equus_asinusENSEASP000050002838.042333.80952amphiprion_perculaENSAPEP0000002584413.62016.45161
ENSEASG00005000310equus_asinusENSEASP000050002837.936514.02116gasterosteus_aculeatusENSGACP0000002012513.11196.64336
ENSEASG00005000310equus_asinusENSEASP000050002837.619054.2328nothobranchius_furzeriENSNFUP0001503723515.38468.54701
ENSEASG00005000310equus_asinusENSEASP000050002838.042333.91534poecilia_formosaENSPFOP0000001302713.17166.41248
ENSEASG00005000310equus_asinusENSEASP000050002838.677254.33862paramormyrops_kingsleyaeENSPKIP000000408009.601874.80094
ENSEASG00005000310equus_asinusENSEASP000050002837.724873.80952maylandia_zebraENSMZEP0000500891413.20076.50995
ENSEASG00005000310equus_asinusENSEASP000050002838.677254.33862myripristis_murdjanENSMMDP0000505202214.16237.08117
ENSEASG00005000310equus_asinusENSEASP000050002839.629634.55026pygocentrus_nattereriENSPNAP0000000238010.15624.79911
ENSEASG00005000310equus_asinusENSEASP000050002839.417994.44444oncorhynchus_tshawytschaENSOTSP000050096489.478174.47284
ENSEASG00005000310equus_asinusENSEASP0000500028322.645515.4497podarcis_muralisENSPMRP0000002444160.968741.5954
ENSEASG00005000310equus_asinusENSEASP000050002837.830694.12698oryzias_sinensisENSOSIP0000004377413.5787.15596
ENSEASG00005000310equus_asinusENSEASP000050002838.253974.2328dicentrarchus_labraxENSDLAP0000500793713.26536.80272
ENSEASG00005000310equus_asinusENSEASP000050002838.465614.44444oryzias_melastigmaENSOMEP0000001359013.67527.17949
ENSEASG00005000310equus_asinusENSEASP000050002837.195773.49206tetraodon_nigroviridisENSTNIP0000000573311.95085.79965
ENSEASG00005000310equus_asinusENSEASP000050002838.783074.12698acanthochromis_polyacanthusENSAPOP0000001024013.13296.17089
ENSEASG00005000310equus_asinusENSEASP0000500028318.412713.1217chelonoidis_abingdoniiENSCABP0000000480657.236840.7895
ENSEASG00005000310equus_asinusENSEASP000050002837.936513.91534mastacembelus_armatusENSMAMP0000003018812.88666.35739
ENSEASG00005000310equus_asinusENSEASP000050002839.206354.2328sinocyclocheilus_grahamiENSSGRP000000289659.623894.42478
ENSEASG00005000310equus_asinusENSEASP000050002836.031752.6455sinocyclocheilus_grahamiENSSGRP0000004383211.97485.2521
ENSEASG00005000310equus_asinusENSEASP0000500028324.021217.4603terrapene_carolina_triunguisENSTMTP0000002216759.268943.0809
ENSEASG00005000310equus_asinusENSEASP000050002838.042333.91534cottoperca_gobioENSCGOP0000003545214.02216.82657
ENSEASG00005000310equus_asinusENSEASP000050002838.253973.91534scleropages_formosusENSSFOP0001500146813.42516.36833
ENSEASG00005000310equus_asinusENSEASP000050002838.571434.2328sander_luciopercaENSSLUP0000001323213.59066.71141
ENSEASG00005000310equus_asinusENSEASP000050002838.677254.02116stegastes_partitusENSSPAP0000000844213.92196.45161
ENSEASG00005000310equus_asinusENSEASP0000500028320.423313.9683salvator_merianaeENSSMRP0000000733556.932238.9381
ENSEASG00005000310equus_asinusENSEASP000050002838.253974.2328takifugu_rubripesENSTRUP0000006245512.68296.50407
ENSEASG00005000310equus_asinusENSEASP000050002837.619053.91534poecilia_latipinnaENSPLAP0000002089113.2116.78899
ENSEASG00005000310equus_asinusENSEASP000050002839.312174.97355oryzias_javanicusENSOJAP0000001572215.04278.03419
ENSEASG00005000310equus_asinusENSEASP000050002837.619053.80952seriola_dumeriliENSSDUP0000001832312.81146.40569
ENSEASG00005000310equus_asinusENSEASP000050002839.312174.2328cyprinus_carpio_carpioENSCCRP000000334819.84344.47427
ENSEASG00005000310equus_asinusENSEASP000050002838.571433.80952cyprinus_carpio_carpioENSCCRP000001131629.225514.10023
ENSEASG00005000310equus_asinusENSEASP0000500028321.481515.5556gopherus_evgoodeiENSGEVP0000501863465.064147.1154
ENSEASG00005000310equus_asinusENSEASP000050002838.042334.02116amphilophus_citrinellusENSACIP0000001327314.04817.02403
ENSEASG00005000310equus_asinusENSEASP000050002838.571434.44444betta_splendensENSBSLP0000001014214.18567.35552
ENSEASG00005000310equus_asinusENSEASP000050002838.042334.02116kryptolebias_marmoratusENSKMAP0000002241512.85966.42978
ENSEASG00005000310equus_asinusENSEASP000050002837.619053.7037pundamilia_nyerereiENSPNYP0000003028013.01996.32911
ENSEASG00005000310equus_asinusENSEASP000050002838.783074.2328seriola_lalandi_dorsalisENSSLDP0000002232013.34416.43087
ENSEASG00005000310equus_asinusENSEASP000050002838.042333.91534amphiprion_ocellarisENSAOCP0000001578113.62016.63082
ENSEASG00005000310equus_asinusENSEASP000050002838.465613.91534denticeps_clupeoidesENSDCDP0000003145013.53646.26058
ENSEASG00005000310equus_asinusENSEASP000050002839.206354.55026hucho_huchoENSHHUP000000661319.206354.55026
ENSEASG00005000310equus_asinusENSEASP000050002838.359794.2328anabas_testudineusENSATEP0000003464513.50436.83761
ENSEASG00005000310equus_asinusENSEASP000050002837.619053.7037neolamprologus_brichardiENSNBRP0000003135113.40786.51769
ENSEASG00005000310equus_asinusENSEASP000050002838.253974.12698scophthalmus_maximusENSSMAP0000000248913.56526.78261

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression