RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSDORG00000015780	Gene ID	105999911	Accession	-
Symbol		Alias	-	Full Name	60S ribosomal protein L36a
Status	Confidence	Length	2520 bases	Strand	Minus strand
Position	KN672549.1 : 526706 - 529225	RNA binding domain	Ribosomal_L44
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSDORP00000014846	Ribosomal_L44	PF00935	6.6e-35	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSDORT00000015780	450	106aa	ENSDORP00000014846

Gene Model

Click here to download ENSDORG00000015780's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSDORG00000015780's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000026796	99.0566	99.0566	dipodomys_ordii	ENSDORP00000014846	99.0566	99.0566
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000027300	94.0594	91.0891	dipodomys_ordii	ENSDORP00000014846	89.6226	86.7924
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000017420	99.0566	99.0566	dipodomys_ordii	ENSDORP00000014846	99.0566	99.0566
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000023904	99.0566	96.2264	dipodomys_ordii	ENSDORP00000014846	99.0566	96.2264
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000026827	98.1132	97.1698	dipodomys_ordii	ENSDORP00000014846	98.1132	97.1698
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000022918	99.0566	99.0566	dipodomys_ordii	ENSDORP00000014846	99.0566	99.0566
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000023510	98.1132	96.2264	dipodomys_ordii	ENSDORP00000014846	98.1132	96.2264

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	99.0566	sarcophilus_harrisii	ENSSHAP00000027853	48.8479	48.3871
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	choloepus_hoffmanni	ENSCHOP00000008466	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	54.717	49.0566	callithrix_jacchus	ENSCJAP00000070598	73.4177	65.8228
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	cercocebus_atys	ENSCATP00000002508	74.6479	74.6479
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	97.1698	97.1698	mandrillus_leucophaeus	ENSMLEP00000003574	97.1698	97.1698
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	80.1887	80.1887	pan_paniscus	ENSPPAP00000036839	73.2759	73.2759
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	pan_troglodytes	ENSPTRP00000078756	74.6479	74.6479
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	pan_troglodytes	ENSPTRP00000038035	74.6479	74.6479
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	physeter_catodon	ENSPCTP00005009096	74.6479	74.6479
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	loxodonta_africana	ENSLAFP00000016108	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	83.9623	81.1321	sus_scrofa	ENSSSCP00000081254	77.3913	74.7826
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	97.1698	96.2264	camelus_dromedarius	ENSCDRP00005019105	66.8831	66.2338
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	bos_taurus	ENSBTAP00000053140	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	99.0566	99.0566	ovis_aries_rambouillet	ENSOARP00020023873	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	ochotona_princeps	ENSOPRP00000008371	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	97.1698	97.1698	marmota_marmota_marmota	ENSMMMP00000019742	75.1825	75.1825
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	cricetulus_griseus_chok1gshd	ENSCGRP00001010777	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	urocitellus_parryii	ENSUPAP00010010202	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	mus_spretus	MGP_SPRETEiJ_P0053749	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	81.1321	77.3585	heterocephalus_glaber_female	ENSHGLP00000028361	85.1485	81.1881
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	99.0566	96.2264	sorex_araneus	ENSSARP00000001952	99.0566	96.2264
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	78.3019	77.3585	aotus_nancymaae	ENSANAP00000040559	95.4023	94.2529
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	jaculus_jaculus	ENSJJAP00000008265	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	catagonus_wagneri	ENSCWAP00000022300	74.6479	74.6479
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	saimiri_boliviensis_boliviensis	ENSSBOP00000035678	74.6479	74.6479
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	75.4717	71.6981	sciurus_vulgaris	ENSSVLP00005024371	91.954	87.3563
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	48.1132	41.5094	microcebus_murinus	ENSMICP00000022114	94.4444	81.4815
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	85.8491	83.9623	microcebus_murinus	ENSMICP00000020602	57.9618	56.6879
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	cebus_imitator	ENSCCAP00000003871	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	panthera_tigris_altaica	ENSPTIP00000022640	74.6479	74.6479
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	99.0566	rhinopithecus_roxellana	ENSRROP00000002017	100	99.0566
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	monodon_monoceros	ENSMMNP00015014955	74.6479	74.6479
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	88.6792	84.9057	phocoena_sinus	ENSPSNP00000031434	92.1569	88.2353
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	cavia_porcellus	ENSCPOP00000026505	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	mus_caroli	MGP_CAROLIEiJ_P0032401	100	100
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	97.1698	94.3396	myotis_lucifugus	ENSMLUP00000012638	97.1698	94.3396
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	91.5094	85.8491	rattus_norvegicus	ENSRNOP00000048252	92.381	86.6667
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	70.7547	69.8113	rattus_norvegicus	ENSRNOP00000086816	96.1538	94.8718
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	96.2264	96.2264	cervus_hanglu_yarkandensis	ENSCHYP00000024620	59.3023	59.3023
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	100	100	nomascus_leucogenys	ENSNLEP00000026704	74.6479	74.6479
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	96.2264	91.5094	callorhinchus_milii	ENSCMIP00000004264	67.5497	64.2384
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	52.8302	45.283	astyanax_mexicanus	ENSAMXP00000027880	80	68.5714
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	95.283	92.4528	poecilia_reticulata	ENSPREP00000018725	71.1268	69.0141
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	99.0566	99.0566	oryzias_latipes	ENSORLP00000030741	61.4035	61.4035
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	99.0566	96.2264	xenopus_tropicalis	ENSXETP00000111246	99.0566	96.2264
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	96.2264	94.3396	crocodylus_porosus	ENSCPRP00005013477	97.1429	95.2381
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	99.0566	96.2264	sphenodon_punctatus	ENSSPUP00000022774	100	97.1429
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	53.7736	47.1698	anolis_carolinensis	ENSACAP00000024226	68.6747	60.241
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	82.0755	79.2453	podarcis_muralis	ENSPMRP00000017654	53.3742	51.5337
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	97.1698	94.3396	salvator_merianae	ENSSMRP00000016923	76.2963	74.0741
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	97.1698	94.3396	denticeps_clupeoides	ENSDCDP00000026378	28.3747	27.5482
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	97.1698	95.283	amphiprion_ocellaris	ENSAOCP00000015454	88.7931	87.069
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	96.2264	91.5094	leptobrachium_leishanense	ENSLLEP00000027703	77.2727	73.4848
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	98.1132	95.283	betta_splendens	ENSBSLP00000053840	63.4146	61.5854
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	98.1132	96.2264	amphiprion_percula	ENSAPEP00000006826	98.1132	96.2264
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	96.2264	92.4528	cyprinus_carpio_carpio	ENSCCRP00000152734	59.6491	57.3099
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	95.283	94.3396	seriola_dumerili	ENSSDUP00000006752	69.1781	68.4931
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	63.2075	58.4906	labrus_bergylta	ENSLBEP00000005280	49.6296	45.9259
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	95.283	92.4528	erpetoichthys_calabaricus	ENSECRP00000019663	75.9398	73.6842
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	98.1132	97.1698	stegastes_partitus	ENSSPAP00000013755	67.0968	66.4516
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	99.0566	98.1132	geospiza_fortis	ENSGFOP00000003384	100	99.0476
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	98.1132	96.2264	hippocampus_comes	ENSHCOP00000021191	98.1132	96.2264
ENSDORG00000015780	dipodomys_ordii	ENSDORP00000014846	99.0566	98.1132	anser_brachyrhynchus	ENSABRP00000000761	100	99.0476

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression