RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSDORG00000002974	Gene ID	105984049	Accession	-
Symbol	Rps3	Alias	-	Full Name	ribosomal protein S3
Status	Confidence	Length	5195 bases	Strand	Plus strand
Position	KN672368.1 : 4563868 - 4569062	RNA binding domain	KH_2 , Ribosomal_S3_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSDORP00000002794	KH_2	PF07650	1.7e-11	1
ENSDORP00000002794	Ribosomal_S3_C	PF00189	1.1e-23	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Rps3-201	ENSDORT00000002973	853	243aa	ENSDORP00000002794

Gene Model

Click here to download ENSDORG00000002974's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSDORG00000002974's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000025603	93.5065	88.961	dipodomys_ordii	ENSDORP00000002794	59.2593	56.3786
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000017589	80.1587	76.1905	dipodomys_ordii	ENSDORP00000002794	41.5638	39.5062
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000023488	37.931	25.2874	dipodomys_ordii	ENSDORP00000002794	27.1605	18.107

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	84.3621	81.07	choloepus_hoffmanni	ENSCHOP00000004720	93.6073	89.9543
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	dasypus_novemcinctus	ENSDNOP00000011538	91.3534	91.3534
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	98.3539	97.9424	erinaceus_europaeus	ENSEEUP00000013268	98.3539	97.9424
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	82.716	82.716	echinops_telfairi	ENSETEP00000012566	82.716	82.716
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	99.5885	99.177	callithrix_jacchus	ENSCJAP00000028461	85.8156	85.461
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	cercocebus_atys	ENSCATP00000023620	90.6716	90.2985
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	papio_anubis	ENSPANP00000000733	93.8224	93.4363
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	mandrillus_leucophaeus	ENSMLEP00000006717	93.8224	93.4363
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	gorilla_gorilla	ENSGGOP00000006379	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	pan_paniscus	ENSPPAP00000012063	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	pan_troglodytes	ENSPTRP00000062955	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	97.9424	96.7078	pongo_abelii	ENSPPYP00000004215	90.8397	89.6947
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	homo_sapiens	ENSP00000434643	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	canis_lupus_familiaris	ENSCAFP00845016559	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	vulpes_vulpes	ENSVVUP00000033702	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	ursus_americanus	ENSUAMP00000027871	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	mustela_putorius_furo	ENSMPUP00000009120	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	felis_catus	ENSFCAP00000011080	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	panthera_leo	ENSPLOP00000008668	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	panthera_pardus	ENSPPRP00000028833	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	tursiops_truncatus	ENSTTRP00000005538	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	delphinapterus_leucas	ENSDLEP00000003876	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	physeter_catodon	ENSPCTP00005017935	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	balaenoptera_musculus	ENSBMSP00010009113	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	loxodonta_africana	ENSLAFP00000003582	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	equus_caballus	ENSECAP00000011789	86.4769	86.4769
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	81.893	81.4815	procavia_capensis	ENSPCAP00000002830	81.893	81.4815
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	sus_scrofa	ENSSSCP00000015774	92.7481	92.3664
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	bos_taurus	ENSBTAP00000003962	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	capra_hircus	ENSCHIP00000009520	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	ovis_aries_rambouillet	ENSOARP00020006090	93.4615	93.0769
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	oryctolagus_cuniculus	ENSOCUP00000018598	86.4769	86.4769
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	73.251	73.251	ochotona_princeps	ENSOPRP00000008678	73.251	73.251
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	76.9547	74.0741	cricetulus_griseus_chok1gshd	ENSCGRP00001003156	90.7767	87.3786
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	cricetulus_griseus_chok1gshd	ENSCGRP00001012207	86.4769	86.4769
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	99.5885	99.5885	urocitellus_parryii	ENSUPAP00010016925	99.5885	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	mesocricetus_auratus	ENSMAUP00000011447	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	mus_spretus	MGP_SPRETEiJ_P0084207	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	99.5885	99.5885	heterocephalus_glaber_female	ENSHGLP00000027191	99.5885	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	89.3004	88.4774	octodon_degus	ENSODEP00000003298	95.5947	94.7137
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	57.2016	53.4979	octodon_degus	ENSODEP00000002300	90.2597	84.4156
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	89.3004	88.0658	octodon_degus	ENSODEP00000000781	95.1754	93.8596
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	80.6584	75.7202	octodon_degus	ENSODEP00000001653	87.8924	82.5112
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	44.0329	41.5638	octodon_degus	ENSODEP00000004932	89.1667	84.1667
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	65.8436	65.0206	octodon_degus	ENSODEP00000009109	99.3789	98.1366
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	tupaia_belangeri	ENSTBEP00000006091	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	95.0617	95.0617	sorex_araneus	ENSSARP00000006343	95.8506	95.8506
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	86.8313	84.7737	aotus_nancymaae	ENSANAP00000010942	93.7778	91.5556
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	otolemur_garnettii	ENSOGAP00000004758	99.5902	99.1803
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	rhinolophus_ferrumequinum	ENSRFEP00010027399	86.4769	86.4769
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	jaculus_jaculus	ENSJJAP00000017418	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	catagonus_wagneri	ENSCWAP00000002419	92.7481	92.3664
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	saimiri_boliviensis_boliviensis	ENSSBOP00000010077	93.8224	93.4363
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	bos_mutus	ENSBMUP00000004815	94.186	93.7984
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	chlorocebus_sabaeus	ENSCSAP00000000282	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	sciurus_vulgaris	ENSSVLP00005028030	94.186	94.186
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	bos_indicus_hybrid	ENSBIXP00005045434	86.4769	86.121
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	microcebus_murinus	ENSMICP00000020936	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	94.2387	94.2387	pteropus_vampyrus	ENSPVAP00000010626	94.6281	94.6281
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	mus_pahari	MGP_PahariEiJ_P0017676	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	neovison_vison	ENSNVIP00000029223	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	cebus_imitator	ENSCCAP00000008838	90	89.6296
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	panthera_tigris_altaica	ENSPTIP00000012853	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	propithecus_coquereli	ENSPCOP00000031940	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	moschus_moschiferus	ENSMMSP00000013766	94.186	93.7984
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	canis_lupus_dingo	ENSCAFP00020002483	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	rhinopithecus_roxellana	ENSRROP00000002484	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	rhinopithecus_bieti	ENSRBIP00000043513	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	vicugna_pacos	ENSVPAP00000010808	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	microtus_ochrogaster	ENSMOCP00000007818	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	mus_musculus	ENSMUSP00000032998	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	monodon_monoceros	ENSMMNP00015027057	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	phocoena_sinus	ENSPSNP00000008404	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	cavia_porcellus	ENSCPOP00000028766	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	bos_grunniens	ENSBGRP00000037211	86.4769	86.121
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	mus_caroli	MGP_CAROLIEiJ_P0080837	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	nannospalax_galili	ENSNGAP00000014114	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	99.5885	99.5885	myotis_lucifugus	ENSMLUP00000003714	99.5885	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	97.5309	96.2963	rattus_norvegicus	ENSRNOP00000009988	97.5309	96.2963
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	cervus_hanglu_yarkandensis	ENSCHYP00000007057	62.6289	62.3711
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	peromyscus_maniculatus_bairdii	ENSPEMP00000025262	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	94.6502	92.5926	carlito_syrichta	ENSTSYP00000018615	85.1852	83.3333
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	bison_bison_bison	ENSBBBP00000026767	94.186	93.7984
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	100	chinchilla_lanigera	ENSCLAP00000020172	100	100
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	61.7284	61.3169	prolemur_simus	ENSPSMP00000026649	99.3377	98.6755
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	100	99.5885	prolemur_simus	ENSPSMP00000003736	100	99.5885
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	85.1852	74.4856	caenorhabditis_elegans	C23G10.3.1	83.8057	73.2794
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	87.6543	80.2469	drosophila_melanogaster	FBpp0312066	86.5854	79.2683
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	88.4774	85.5967	ciona_intestinalis	ENSCINP00000010313	81.749	79.0875
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	78.6008	73.6626	petromyzon_marinus	ENSPMAP00000008596	95.5	89.5
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	59.2593	53.4979	eptatretus_burgeri	ENSEBUP00000005415	79.558	71.8232
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	98.3539	97.9424	callorhinchus_milii	ENSCMIP00000043843	95.6	95.2
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	98.3539	95.8848	fundulus_heteroclitus	ENSFHEP00000034432	97.551	95.102
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	98.3539	97.9424	notechis_scutatus	ENSNSUP00000023821	98.3539	97.9424
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	98.3539	97.9424	pseudonaja_textilis	ENSPTXP00000021463	98.3539	97.9424
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	86.8313	84.7737	naja_naja	ENSNNAP00000012024	84.4	82.4
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	88.4774	84.7737	ciona_savignyi	ENSCSAVP00000005843	83.6576	80.1556
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	97.9424	96.7078	nothobranchius_furzeri	ENSNFUP00015032038	94.4444	93.254
ENSDORG00000002974	dipodomys_ordii	ENSDORP00000002794	77.7778	65.8436	saccharomyces_cerevisiae	YNL178W	78.75	66.6667

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression