Description

Ensembl ID ENSDNVG00000007061 Gene ID 112984098 Accession -
Symbol Alias - Full Name 5'-3' exoribonuclease 1
Status Confidence Length 36705 bases Strand Minus strand
Position PTEY01000242.1 : 315832 - 352536 RNA binding domain SH3_12 , XRN_N , XRN1_D1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSDNVP00000011219 SH3_12 PF18129 6.9e-20 1
ENSDNVP00000011219 XRN_N PF03159 3.6e-92 2
ENSDNVP00000011219 XRN1_D1 PF18332 6.2e-31 3
ENSDNVP00000011130 SH3_12 PF18129 7e-20 1
ENSDNVP00000011130 XRN_N PF03159 3.3e-92 2
ENSDNVP00000011130 XRN1_D1 PF18332 1.4e-31 3
ENSDNVP00000011190 SH3_12 PF18129 7.2e-20 1
ENSDNVP00000011190 XRN_N PF03159 3.5e-92 2
ENSDNVP00000011190 XRN1_D1 PF18332 6.4e-31 3
ENSDNVP00000011237 XRN_N PF03159 1.6e-92 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSDNVT00000013411 5070 1689aa ENSDNVP00000011130
- ENSDNVT00000013485 4926 1641aa ENSDNVP00000011190
- ENSDNVT00000013522 4824 1607aa ENSDNVP00000011219
- ENSDNVT00000013546 2901 966aa ENSDNVP00000011237

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSDNVG00000007061

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSDNVG00000007061

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression