RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSDNVG00000006750	Gene ID	112979812	Accession	-
Symbol		Alias	-	Full Name	tRNA methyltransferase 13 homolog
Status	Confidence	Length	6414 bases	Strand	Minus strand
Position	PTEY01000147.1 : 538130 - 544543	RNA binding domain	TRM13 , zf-TRM13_CCCH , zf-U11-48K
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSDNVP00000009549	TRM13	PF05206	2.5e-70	1
ENSDNVP00000009549	zf-TRM13_CCCH	PF11722	2.7e-12	2
ENSDNVP00000009549	zf-U11-48K	PF05253	5.8e-11	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSDNVT00000011467	1583	493aa	ENSDNVP00000009549

Gene Model

Click here to download ENSDNVG00000006750's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSDNVG00000006750's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDNVG00000006750

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSDNVG00000006750

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression